RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 FBXO3Q9UK99 471 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 MYH7P12883 1935 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 EXOC5O00471 708 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 CSF1RP07333 972 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
PHGDH-211ENST00000641213 CYP19A1P11511 503 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-211ENST00000641213 HLFQ16534 295 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 HELLSQ9NRZ9 838 aa20.36■□□□□ 0.85
PHGDH-211ENST00000641213 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
PHGDH-211ENST00000641213 RRAGDQ9NQL2 400 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-211ENST00000641213 MTMR6Q9Y217 621 aa20.35■□□□□ 0.85
PHGDH-211ENST00000641213 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
PHGDH-211ENST00000641213 SYCE3A1L190 88 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 RBSNQ9H1K0 784 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 CYP21A2P08686 494 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 ZMYM1Q5SVZ6 1142 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.34■□□□□ 0.85
PHGDH-211ENST00000641213 CCDC85AQ96PX6 553 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-211ENST00000641213 NEK1Q96PY6 1258 aa20.34■□□□□ 0.85
PHGDH-211ENST00000641213 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
PHGDH-211ENST00000641213 SYNE4Q8N205 404 aa20.33■□□□□ 0.85
PHGDH-211ENST00000641213 IFIT5Q13325 482 aaKnown RBP20.33■□□□□ 0.84
PHGDH-211ENST00000641213 AKAP2Q9Y2D5 859 aa20.33■□□□□ 0.84
PHGDH-211ENST00000641213 GPTP24298 496 aa20.32■□□□□ 0.84
PHGDH-211ENST00000641213 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-211ENST00000641213 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
PHGDH-211ENST00000641213 NRAPQ86VF7 1730 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 RNF113AO15541 343 aaKnown RBP20.31■□□□□ 0.84
PHGDH-211ENST00000641213 CCDC173Q0VFZ6 552 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 HSP90AB3PQ58FF7 597 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 SYAP1Q96A49 352 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-211ENST00000641213 XAGE2Q96GT9 111 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 DSCC1Q9BVC3 393 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 AKAP11Q9UKA4 1901 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 ADORA1P30542 326 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 TAF7LQ5H9L4 462 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
PHGDH-211ENST00000641213 CCDC158Q5M9N0 1113 aa20.3■□□□□ 0.84
PHGDH-211ENST00000641213 LARP1BQ659C4 914 aaKnown RBP20.3■□□□□ 0.84
PHGDH-211ENST00000641213 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-211ENST00000641213 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
PHGDH-211ENST00000641213 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
PHGDH-211ENST00000641213 MAST3O60307 1309 aa20.29■□□□□ 0.84
PHGDH-211ENST00000641213 RIC1Q4ADV7 1423 aa20.29■□□□□ 0.84
PHGDH-211ENST00000641213 PDIA4P13667 645 aaKnown RBP20.29■□□□□ 0.84
PHGDH-211ENST00000641213 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
PHGDH-211ENST00000641213 STOX1Q6ZVD7 989 aa20.29■□□□□ 0.84
PHGDH-211ENST00000641213 ANP32BQ92688 251 aaKnown RBP20.29■□□□□ 0.84
PHGDH-211ENST00000641213 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
PHGDH-211ENST00000641213 STK3Q13188 491 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 Q6ZUG5 572 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 NWD2Q9ULI1 1742 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
PHGDH-211ENST00000641213 HSPD1P10809 573 aaKnown RBP20.28■□□□□ 0.84
PHGDH-211ENST00000641213 PDCP20941 246 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 DNM1Q05193 864 aaKnown RBP20.28■□□□□ 0.84
PHGDH-211ENST00000641213 GREM2Q9H772 168 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 RIPOR2Q9Y4F9 1068 aa20.28■□□□□ 0.84
PHGDH-211ENST00000641213 FIBPO43427 364 aa20.27■□□□□ 0.84
PHGDH-211ENST00000641213 ITGA6P23229 1130 aa20.27■□□□□ 0.84
PHGDH-211ENST00000641213 CTSWP56202 376 aa20.27■□□□□ 0.84
PHGDH-211ENST00000641213 UBE2HP62256 183 aa20.27■□□□□ 0.84
PHGDH-211ENST00000641213 TRIM44Q96DX7 344 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-211ENST00000641213 ERVV-1B6SEH8 477 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 M0R2C6 588 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-211ENST00000641213 GTF3C6Q969F1 213 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 IRS4O14654 1257 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-211ENST00000641213 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
PHGDH-211ENST00000641213 SCARF1Q14162 830 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 CDC37L1Q7L3B6 337 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
PHGDH-211ENST00000641213 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
PHGDH-211ENST00000641213 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
PHGDH-211ENST00000641213 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 LDHAL6AQ6ZMR3 332 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 OSBP2Q969R2 916 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 CDCA7Q9BWT1 371 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-211ENST00000641213 PHF14O94880 888 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 ATP2B3Q16720 1220 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 CSPP1Q1MSJ5 1256 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
PHGDH-211ENST00000641213 ABCC12Q96J65 1359 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 A0A0G2JLW4 131 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
PHGDH-211ENST00000641213 DHX32Q7L7V1 743 aaKnown RBP20.24■□□□□ 0.83
PHGDH-211ENST00000641213 LRRC2Q9BYS8 371 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 UBN2Q6ZU65 1347 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 SLIT2O94813 1529 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 MYH15Q9Y2K3 1946 aa20.24■□□□□ 0.83
PHGDH-211ENST00000641213 PDE8AO60658 829 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
PHGDH-211ENST00000641213 ZAP70P43403 619 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 ZNF34Q8IZ26 560 aa20.23■□□□□ 0.83
PHGDH-211ENST00000641213 BRF1Q92994 677 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms