RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
KCNC1-213ENST00000640909 ANGEL2Q5VTE6 544 aaKnown RBP19.34■□□□□ 0.69
KCNC1-213ENST00000640909 HCLS1P14317 486 aaPredicted RBP19.33■□□□□ 0.68
KCNC1-213ENST00000640909 NLRP10Q86W26 655 aa19.33■□□□□ 0.68
KCNC1-213ENST00000640909 AGBL3Q8NEM8 1001 aa19.33■□□□□ 0.68
KCNC1-213ENST00000640909 LAMB1P07942 1786 aa19.33■□□□□ 0.68
KCNC1-213ENST00000640909 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
KCNC1-213ENST00000640909 POLLQ9UGP5 575 aa19.32■□□□□ 0.68
KCNC1-213ENST00000640909 ASTN2O75129 1339 aaPredicted RBP19.31■□□□□ 0.68
KCNC1-213ENST00000640909 RIMBP2O15034 1052 aa19.31■□□□□ 0.68
KCNC1-213ENST00000640909 ALDH1A1P00352 501 aa19.31■□□□□ 0.68
KCNC1-213ENST00000640909 SCARF1Q14162 830 aa19.31■□□□□ 0.68
KCNC1-213ENST00000640909 TRMT112Q9UI30 125 aaKnown RBP19.31■□□□□ 0.68
KCNC1-213ENST00000640909 KCNQ5Q9NR82 932 aa19.3■□□□□ 0.68
KCNC1-213ENST00000640909 POTEFA5A3E0 1075 aa19.29■□□□□ 0.68
KCNC1-213ENST00000640909 PDIA6Q15084 440 aa19.29■□□□□ 0.68
KCNC1-213ENST00000640909 ZC3H12CQ9C0D7 883 aaKnown RBP19.29■□□□□ 0.68
KCNC1-213ENST00000640909 NEFMP07197 916 aa19.28■□□□□ 0.68
KCNC1-213ENST00000640909 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
KCNC1-213ENST00000640909 SF3B3Q15393 1217 aaKnown RBP19.28■□□□□ 0.68
KCNC1-213ENST00000640909 DOK7Q18PE1 504 aa19.28■□□□□ 0.68
KCNC1-213ENST00000640909 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
KCNC1-213ENST00000640909 TBC1D16Q8TBP0 767 aa19.28■□□□□ 0.68
KCNC1-213ENST00000640909 PODXL2Q9NZ53 605 aa19.28■□□□□ 0.68
KCNC1-213ENST00000640909 NF2P35240 595 aa19.27■□□□□ 0.68
KCNC1-213ENST00000640909 GPSM2P81274 684 aa19.27■□□□□ 0.68
KCNC1-213ENST00000640909 CELF1Q92879 486 aaKnown RBP19.27■□□□□ 0.68
KCNC1-213ENST00000640909 MYOZ2Q9NPC6 264 aa19.27■□□□□ 0.68
KCNC1-213ENST00000640909 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
KCNC1-213ENST00000640909 TRIM17Q9Y577 477 aa19.26■□□□□ 0.67
KCNC1-213ENST00000640909 USP17L8P0C7I0 530 aa19.25■□□□□ 0.67
KCNC1-213ENST00000640909 INHBEP58166 350 aa19.25■□□□□ 0.67
KCNC1-213ENST00000640909 MOB2Q70IA6 237 aa19.25■□□□□ 0.67
KCNC1-213ENST00000640909 OTOP1Q7RTM1 612 aa19.25■□□□□ 0.67
KCNC1-213ENST00000640909 ARMC5Q96C12 935 aa19.25■□□□□ 0.67
KCNC1-213ENST00000640909 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
KCNC1-213ENST00000640909 SZT2Q5T011 3432 aa19.24■□□□□ 0.67
KCNC1-213ENST00000640909 G3V3G9 751 aa19.24■□□□□ 0.67
KCNC1-213ENST00000640909 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
KCNC1-213ENST00000640909 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
KCNC1-213ENST00000640909 GMLQ99445 158 aa19.24■□□□□ 0.67
KCNC1-213ENST00000640909 COL4A1P02462 1669 aa19.24■□□□□ 0.67
KCNC1-213ENST00000640909 ERO1AQ96HE7 468 aa19.23■□□□□ 0.67
KCNC1-213ENST00000640909 COLQQ9Y215 455 aaPredicted RBP19.23■□□□□ 0.67
KCNC1-213ENST00000640909 MMP14P50281 582 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 COPS6Q7L5N1 327 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 ARMC9Q7Z3E5 817 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 R3HDMLQ9H3Y0 253 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
KCNC1-213ENST00000640909 MANSC4A6NHS7 340 aaPredicted RBP19.21■□□□□ 0.67
KCNC1-213ENST00000640909 EIF2S2P20042 333 aaKnown RBP19.21■□□□□ 0.67
KCNC1-213ENST00000640909 RPS8P62241 208 aaKnown RBP19.21■□□□□ 0.67
KCNC1-213ENST00000640909 BABAM1Q9NWV8 329 aa19.21■□□□□ 0.67
KCNC1-213ENST00000640909 GGA1Q9UJY5 639 aa19.21■□□□□ 0.67
KCNC1-213ENST00000640909 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
KCNC1-213ENST00000640909 UFL1O94874 794 aa19.2■□□□□ 0.66
KCNC1-213ENST00000640909 MKRN3Q13064 507 aaKnown RBP19.2■□□□□ 0.66
KCNC1-213ENST00000640909 SPRYD7Q5W111 196 aa19.2■□□□□ 0.66
KCNC1-213ENST00000640909 PODNQ7Z5L7 613 aa19.2■□□□□ 0.66
KCNC1-213ENST00000640909 TSPYL4Q9UJ04 414 aa19.2■□□□□ 0.66
KCNC1-213ENST00000640909 ZNF646O15015 1829 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-213ENST00000640909 ZBTB48P10074 688 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-213ENST00000640909 EN2P19622 333 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-213ENST00000640909 CNGB1Q14028 1251 aaPredicted RBP19.19■□□□□ 0.66
KCNC1-213ENST00000640909 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
KCNC1-213ENST00000640909 IFNL1Q8IU54 200 aa19.19■□□□□ 0.66
KCNC1-213ENST00000640909 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
KCNC1-213ENST00000640909 USP17L3A6NCW0 530 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 USP17L4A6NCW7 530 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 ANXA1P04083 346 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
KCNC1-213ENST00000640909 AIMP1Q12904 312 aaKnown RBP19.18■□□□□ 0.66
KCNC1-213ENST00000640909 LDLRAD1Q5T700 205 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 USP17L1Q7RTZ2 530 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 TMEM106CQ9BVX2 250 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 MYO3BQ8WXR4 1341 aa19.18■□□□□ 0.66
KCNC1-213ENST00000640909 DLL1O00548 723 aa19.17■□□□□ 0.66
KCNC1-213ENST00000640909 HSP90B1P14625 803 aaKnown RBP19.17■□□□□ 0.66
KCNC1-213ENST00000640909 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
KCNC1-213ENST00000640909 APOBEC3FQ8IUX4 373 aaKnown RBP19.17■□□□□ 0.66
KCNC1-213ENST00000640909 OGFOD1Q8N543 542 aa19.17■□□□□ 0.66
KCNC1-213ENST00000640909 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
KCNC1-213ENST00000640909 ISCA1Q9BUE6 129 aa19.17■□□□□ 0.66
KCNC1-213ENST00000640909 KIAA0100Q14667 2235 aaKnown RBP19.17■□□□□ 0.66
KCNC1-213ENST00000640909 UNCXA6NJT0 531 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 WNT10BO00744 389 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 PRAMEF18Q5VWM3 479 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 PLBD2Q8NHP8 589 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 OTUD5Q96G74 571 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
KCNC1-213ENST00000640909 ZNF333Q96JL9 665 aa19.15■□□□□ 0.66
KCNC1-213ENST00000640909 EFCC1Q9HA90 598 aa19.15■□□□□ 0.66
KCNC1-213ENST00000640909 MAP3K11Q16584 847 aa19.14■□□□□ 0.65
KCNC1-213ENST00000640909 OTUD7BQ6GQQ9 843 aa19.14■□□□□ 0.65
KCNC1-213ENST00000640909 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
KCNC1-213ENST00000640909 PNNQ9H307 717 aaKnown RBP19.14■□□□□ 0.65
KCNC1-213ENST00000640909 SCAF8Q9UPN6 1271 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms