RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTTN-218ENST00000640408 GRPEL1Q9HAV7 217 aa6.74□□□□□ -1.33
RTTN-218ENST00000640408 GYS1P13807 737 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 CLCN1P35523 988 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 LRRCC1Q9C099 1032 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 LRRFIP2Q9Y608 721 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 H7C1W4 665 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 NEFHP12036 1026 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 SSR1P43307 286 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 EIF6P56537 245 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 MPNDQ8N594 471 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 ANKRD44Q8N8A2 993 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 CRBNQ96SW2 442 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 SRP68Q9UHB9 627 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 GGA1Q9UJY5 639 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 MROH5Q6ZUA9 1318 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 DYNC1I1O14576 645 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 TRAK2O60296 914 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 PIP4K2AP48426 406 aaPredicted RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 GTF2A1P52655 376 aaPredicted RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 CTSWP56202 376 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 MSL1Q68DK7 614 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 DPP8Q6V1X1 898 aaPredicted RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 G2E3Q7L622 706 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 ZSCAN30Q86W11 494 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 NSFL1CQ9UNZ2 370 aaKnown RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 BCS1LQ9Y276 419 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 EYA2O00167 538 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 OGFOD1Q8N543 542 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 TBC1D22AQ8WUA7 517 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 AKT1S1Q96B36 256 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 SPINK5Q9NQ38 1064 aaPredicted RBP6.73□□□□□ -1.33
RTTN-218ENST00000640408 ABCC4O15439 1325 aa6.73□□□□□ -1.33
RTTN-218ENST00000640408 KCNQ4P56696 695 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 PLA2G12BQ9BX93 195 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 PLCH1Q4KWH8 1693 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 PLIN1O60240 522 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 MMP14P50281 582 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 WASHC4Q2M389 1173 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
RTTN-218ENST00000640408 MAST3O60307 1309 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 GLI3P10071 1580 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 HCLS1P14317 486 aaPredicted RBP6.72□□□□□ -1.33
RTTN-218ENST00000640408 MAPK8IP2Q13387 824 aaPredicted RBP6.72□□□□□ -1.33
RTTN-218ENST00000640408 GRAPQ13588 217 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 UBE4AQ14139 1066 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 ATP2B3Q16720 1220 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 ANKRD45Q5TZF3 282 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 GRAPLQ8TC17 118 aaPredicted RBP6.72□□□□□ -1.33
RTTN-218ENST00000640408 CHMP4CQ96CF2 233 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 CTR9Q6PD62 1173 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 MRC1P22897 1456 aa6.72□□□□□ -1.33
RTTN-218ENST00000640408 TTF1Q15361 905 aaPredicted RBP6.71□□□□□ -1.33
RTTN-218ENST00000640408 VPS33BQ9H267 617 aa6.71□□□□□ -1.33
RTTN-218ENST00000640408 COL18A1P39060 1754 aa6.71□□□□□ -1.33
RTTN-218ENST00000640408 APBB1O00213 710 aa6.71□□□□□ -1.33
RTTN-218ENST00000640408 LMOD1P29536 600 aaPredicted RBP6.71□□□□□ -1.33
RTTN-218ENST00000640408 PROSER3Q2NL68 480 aa6.71□□□□□ -1.33
RTTN-218ENST00000640408 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.33
RTTN-218ENST00000640408 H0YHG0 523 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 GLRX3O76003 335 aaKnown RBP6.71□□□□□ -1.34
RTTN-218ENST00000640408 TTC39AQ5SRH9 613 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
RTTN-218ENST00000640408 LARGE2Q8N3Y3 721 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 ZNF592Q92610 1267 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 COPRSQ9NQ92 184 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 LRRC4BQ9NT99 713 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 LRRC37A3O60309 1634 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 ITGA6P23229 1130 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 GSTO1P78417 241 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 TNIP1Q15025 636 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 GPATCH11Q8N954 259 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 XDHP47989 1333 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 PEAK1Q9H792 1746 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 CBX1P83916 185 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 HSP90B2PQ58FF3 399 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 SUSD4Q5VX71 490 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 PRR5LQ6MZQ0 368 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 HOOK2Q96ED9 719 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 MEIS3Q99687 375 aa6.71□□□□□ -1.34
RTTN-218ENST00000640408 SEMA3EO15041 775 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 MYO1BO43795 1136 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 CIAO1O76071 339 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 TRIM34Q9BYJ4 488 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 USP44Q9H0E7 712 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 GPR108Q9NPR9 543 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 TBC1D9BQ66K14 1250 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 SP8Q8IXZ3 490 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 WDR66Q8TBY9 1149 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 KIF20AO95235 890 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 PLCG2P16885 1265 aa6.7□□□□□ -1.34
RTTN-218ENST00000640408 MTX1Q13505 466 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms