RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	SMARCC1	Q92922	1105 aa	Predicted RBP	10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	SDF4	Q9BRK5	362 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	PDRG1	Q9NUG6	133 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	ZNF500	O60304	480 aa	Predicted RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	BRD1	O95696	1058 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	CAST	P20810	708 aa	Known RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	FAM89A	Q96GI7	184 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	ATG3	Q9NT62	314 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	KIAA1210	Q9ULL0	1709 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352		A0A087WZG4	1122 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	PPFIA3	O75145	1194 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	GLRX3	O76003	335 aa	Known RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	BRPF1	P55201	1214 aa	Predicted RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	CKAP2L	Q8IYA6	745 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	MYRIP	Q8NFW9	859 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	CALCOCO1	Q9P1Z2	691 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	RGPD8	O14715	1765 aa	Predicted RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	OVOS2	A0A0J9YW53	1432 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	OVOS2	Q6IE36	1432 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	UVSSA	Q2YD98	709 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	CLEC17A	Q6ZS10	378 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	ANKRD13D	Q6ZTN6	518 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	NECAB1	Q8N987	351 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	NEUROD6	Q96NK8	337 aa		10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	DBF4	Q9UBU7	674 aa	Predicted RBP	10.26	□□□□□ -0.77
CNTN2-231	ENST00000640352	LIMCH1	Q9UPQ0	1083 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	CHL1	O00533	1208 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	CRKL	P46109	303 aa	Known RBP	10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	ANKRD1	Q15327	319 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	BLOC1S2	Q6QNY1	142 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	USP31	Q70CQ4	1352 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	U2AF2	P26368	475 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	ANAPC15	P60006	121 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	PTPN14	Q15678	1187 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	USPL1	Q5W0Q7	1092 aa		10.25	□□□□□ -0.77
CNTN2-231	ENST00000640352	SMC2	O95347	1197 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	TRMT1	Q9NXH9	659 aa	Known RBP	10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	DNM1	Q05193	864 aa	Known RBP	10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	AACS	Q86V21	672 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	RASEF	Q8IZ41	740 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	KIN	O60870	393 aa	Known RBP	10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	EIF4A1	P60842	406 aa	Known RBP	10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	STK3	Q13188	491 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	CREBRF	Q8IUR6	639 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	STRCP1	A6NGW2	1772 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	PALLD	Q8WX93	1383 aa		10.24	□□□□□ -0.77
CNTN2-231	ENST00000640352	MPHOSPH10	O00566	681 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	PIK3R5	Q8WYR1	880 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	SETDB2	Q96T68	719 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352		V9GYY5	206 aa	Predicted RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	ATP10D	Q9P241	1426 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	GOLGB1	Q14789	3259 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	LARGE1	O95461	756 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	AK2	P54819	239 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	PRPF40B	Q6NWY9	871 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	FAM177A1	Q8N128	213 aa	Predicted RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	SPATA32	Q96LK8	384 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	TFIP11	Q9UBB9	837 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	ROBO1	Q9Y6N7	1651 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	CPLX1	O14810	134 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	STX6	O43752	255 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	CCDC186	Q7Z3E2	898 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	CWC15	Q9P013	229 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	GIGYF1	O75420	1035 aa	Predicted RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	UBE2H	P62256	183 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	ILDR2	Q71H61	639 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	HELB	Q8NG08	1087 aa	Predicted RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	PIBF1	Q8WXW3	757 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	CCDC87	Q9NVE4	849 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	CLIP2	Q9UDT6	1046 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	JAG2	Q9Y219	1238 aa		10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	THRAP3	Q9Y2W1	955 aa	Known RBP	10.23	□□□□□ -0.77
CNTN2-231	ENST00000640352	ERVV-2	B6SEH9	535 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	SYT1	P21579	422 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	PPP1R42	Q7Z4L9	355 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	SYNE4	Q8N205	404 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	RGS17	Q9UGC6	210 aa	Predicted RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	CCDC34	Q96HJ3	373 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	NAT10	Q9H0A0	1025 aa	Known RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	RIOK3	O14730	519 aa	Known RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	ZBTB22	O15209	634 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	POLR3G	O15318	223 aa	Predicted RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	ATP8B2	P98198	1209 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	CPLX2	Q6PUV4	134 aa	Known RBP	10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	KIF18A	Q8NI77	898 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	DNAAF4	Q8WXU2	420 aa		10.22	□□□□□ -0.77
CNTN2-231	ENST00000640352	SKIDA1	Q1XH10	827 aa		10.21	□□□□□ -0.77
CNTN2-231	ENST00000640352	KRT222	Q8N1A0	295 aa		10.21	□□□□□ -0.77
CNTN2-231	ENST00000640352	CNNM1	Q9NRU3	951 aa		10.21	□□□□□ -0.77
CNTN2-231	ENST00000640352	CAMTA1	Q9Y6Y1	1673 aa		10.21	□□□□□ -0.77
CNTN2-231	ENST00000640352	IBSP	P21815	317 aa	Predicted RBP	10.21	□□□□□ -0.78
CNTN2-231	ENST00000640352	VPS37D	Q86XT2	251 aa		10.21	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms