RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.34	□□□□□ -0.75
PAX6-267	ENST00000640251	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
PAX6-267	ENST00000640251	LRRC9	Q6ZRR7	1453 aa		10.34	□□□□□ -0.75
PAX6-267	ENST00000640251	PLEKHH2	Q8IVE3	1493 aa		10.34	□□□□□ -0.75
PAX6-267	ENST00000640251	CAMSAP1	Q5T5Y3	1602 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	KIF3B	O15066	747 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	EFS	O43281	561 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	ATP2B4	P23634	1241 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	MAP3K10	Q02779	954 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	GRIN2C	Q14957	1233 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	BRD7	Q9NPI1	651 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	BCS1L	Q9Y276	419 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	MYO3A	Q8NEV4	1616 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	PTPRK	Q15262	1439 aa		10.33	□□□□□ -0.76
PAX6-267	ENST00000640251	MROH2A	A6NES4	1674 aa		10.32	□□□□□ -0.76
PAX6-267	ENST00000640251	NAA30	Q147X3	362 aa	Predicted RBP	10.32	□□□□□ -0.76
PAX6-267	ENST00000640251	HIF1A	Q16665	826 aa		10.32	□□□□□ -0.76
PAX6-267	ENST00000640251	BTLA	Q7Z6A9	289 aa		10.32	□□□□□ -0.76
PAX6-267	ENST00000640251	CCDC141	Q6ZP82	1450 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	TMEM88B	A6NKF7	163 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	BCR	P11274	1271 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	TYRO3	Q06418	890 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	LAMC2	Q13753	1193 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	LRFN2	Q9ULH4	789 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	PRR12	Q9ULL5	1215 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	NCOA1	Q15788	1441 aa		10.31	□□□□□ -0.76
PAX6-267	ENST00000640251	DHX29	Q7Z478	1369 aa	Known RBP	10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	C11orf91	Q3C1V1	193 aa		10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	COX20	Q5RI15	118 aa		10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	SAP130	Q9H0E3	1048 aa		10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	GGA1	Q9UJY5	639 aa		10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	CFAP65	Q6ZU64	1925 aa	Known RBP	10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	CNTLN	Q9NXG0	1405 aa		10.3	□□□□□ -0.76
PAX6-267	ENST00000640251	LTBP4	Q8N2S1	1624 aa		10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	TGFBR3L	H3BV60	316 aa		10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	FAM182B	Q5T319	152 aa		10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	MYO19	Q96H55	970 aa		10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.29	□□□□□ -0.76
PAX6-267	ENST00000640251	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	NEURL1B	A8MQ27	555 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	ARHGEF15	O94989	841 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	SCNN1A	P37088	669 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	PCBP4	P57723	403 aa	Known RBP	10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	GALNT6	Q8NCL4	622 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	IFT43	Q96FT9	208 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	SLC30A3	Q99726	388 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	GDF2	Q9UK05	429 aa	Predicted RBP	10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	ADAMTS8	Q9UP79	889 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	KCNH4	Q9UQ05	1017 aa		10.28	□□□□□ -0.76
PAX6-267	ENST00000640251	ARHGEF5	Q12774	1597 aa		10.27	□□□□□ -0.76
PAX6-267	ENST00000640251	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	ARAF	P10398	606 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	C16orf46	Q6P387	395 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	GOLGA6L1	Q8N7Z2	621 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	NEDD1	Q8NHV4	660 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	ENAM	Q9NRM1	1142 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	DMGDH	Q9UI17	866 aa	Known RBP	10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	ZNF142	P52746	1687 aa	Predicted RBP	10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	CEP152	O94986	1710 aa		10.27	□□□□□ -0.77
PAX6-267	ENST00000640251	NPAT	Q14207	1427 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	OIP5	O43482	229 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	PTCD1	O75127	700 aa	Known RBP	10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	MICAL2	O94851	1124 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	IDH3A	P50213	366 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	SPEM2	Q0P670	501 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	IER5	Q5VY09	327 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	COL26A1	Q96A83	441 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	SEPT3	Q9UH03	358 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	KLF15	Q9UIH9	416 aa		10.26	□□□□□ -0.77
PAX6-267	ENST00000640251	DNMT1	P26358	1616 aa	Known RBP	10.25	□□□□□ -0.77
PAX6-267	ENST00000640251	PTPRT	O14522	1441 aa		10.25	□□□□□ -0.77
PAX6-267	ENST00000640251	MYOM3	Q5VTT5	1437 aa		10.25	□□□□□ -0.77
PAX6-267	ENST00000640251	EDARADD	Q8WWZ3	215 aa		10.25	□□□□□ -0.77
PAX6-267	ENST00000640251	MROH1	Q8NDA8	1641 aa		10.25	□□□□□ -0.77
PAX6-267	ENST00000640251	ADH6	P28332	368 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	MARS	P56192	900 aa	Known RBP	10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	KCNQ4	P56696	695 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	SYT9	Q86SS6	491 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	RRP7BP	Q9NSQ0	103 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	WASHC2C	Q9Y4E1	1318 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	TNR	Q92752	1358 aa		10.24	□□□□□ -0.77
PAX6-267	ENST00000640251	KDM5D	Q9BY66	1539 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	PTPN23	Q9H3S7	1636 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	SHISA8	B8ZZ34	492 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	TSPY4	P0CV99	314 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	TSPY10	P0CW01	314 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	SSFA2	P28290	1259 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	INPP5B	P32019	993 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	SLCO4C1	Q6ZQN7	724 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	TREML1	Q86YW5	311 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	USP20	Q9Y2K6	914 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	ABCC5	O15440	1437 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	A2ML1	A8K2U0	1454 aa		10.23	□□□□□ -0.77
PAX6-267	ENST00000640251	NEURL4	Q96JN8	1562 aa		10.22	□□□□□ -0.77
PAX6-267	ENST00000640251	BRD2	P25440	801 aa	Known RBP	10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms