RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 RNF187Q5TA31 235 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 TNRQ92752 1358 aa16.84■□□□□ 0.29
HNRNPU-226ENST00000640218 TMTC2Q8N394 836 aa16.83■□□□□ 0.29
HNRNPU-226ENST00000640218 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.29
HNRNPU-226ENST00000640218 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.29
HNRNPU-226ENST00000640218 MSH6P52701 1360 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 SLC9C2Q5TAH2 1124 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 ERMNQ8TAM6 284 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 GNG11P61952 73 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 DNAJC5BQ9UF47 199 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
HNRNPU-226ENST00000640218 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 MRPL50Q8N5N7 158 aaKnown RBP16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 KDM5BQ9UGL1 1544 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 CEP135Q66GS9 1140 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 MAATS1Q7Z4T9 603 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 ANKRD44Q8N8A2 993 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 COMMD10Q9Y6G5 202 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 STAMBPO95630 424 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 MARCKSP29966 332 aaPredicted RBP16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 KCNG4Q8TDN1 519 aa16.82■□□□□ 0.28
HNRNPU-226ENST00000640218 AKR1B10O60218 316 aa16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 ANO6Q4KMQ2 910 aa16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 MPHOSPH6Q99547 160 aaKnown RBP16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 IL15P40933 162 aaPredicted RBP16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 SMARCC1Q92922 1105 aaPredicted RBP16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 TBC1D5Q92609 795 aa16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 USP48Q86UV5 1035 aa16.81■□□□□ 0.28
HNRNPU-226ENST00000640218 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 CAVIN2O95810 425 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 PAG1Q9NWQ8 432 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 NMIQ13287 307 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 NAPAP54920 295 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 MAGEB6P1A0A0J9YX57 407 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 NF2P35240 595 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 PSMD1Q99460 953 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
HNRNPU-226ENST00000640218 BMP15O95972 392 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 IFI16Q16666 785 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 CCDC175P0C221 793 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.288e-14■■■■□ 23.1
HNRNPU-226ENST00000640218 SPAG5Q96R06 1193 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 HOMER2Q9NSB8 354 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 CCDC172P0C7W6 258 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 GNAQP50148 359 aa16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 MRPS27Q92552 414 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-226ENST00000640218 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 ZNF804AQ7Z570 1209 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 SYNCQ9H7C4 482 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 LMAN1P49257 510 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 MICALCLQ6ZW33 695 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 CTAGE1Q96RT6 745 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 OGFOD1Q8N543 542 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 DZIP3Q86Y13 1208 aaKnown RBP16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 EHBP1Q8NDI1 1231 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
HNRNPU-226ENST00000640218 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 CALM1P0DP23 149 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 CALM2P0DP24 149 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 CALM3P0DP25 149 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 KIAA0753Q2KHM9 967 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 ACTN2P35609 894 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 ASIC1P78348 528 aa16.77■□□□□ 0.28
HNRNPU-226ENST00000640218 PHACTR2O75167 634 aa16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 FERMT1Q9BQL6 677 aa16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 SMARCC2Q8TAQ2 1214 aa16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 KRT13P13646 458 aa16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 DHX58Q96C10 678 aa16.77■□□□□ 0.27
HNRNPU-226ENST00000640218 DDB1Q16531 1140 aa16.76■□□□□ 0.27
HNRNPU-226ENST00000640218 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms