RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 COL13A1Q5TAT6 717 aaPredicted RBP6.22□□□□□ -1.41
ATM-228ENST00000639240 MKNK1Q9BUB5 465 aa6.22□□□□□ -1.41
ATM-228ENST00000639240 CXXC1Q9P0U4 656 aaPredicted RBP6.22□□□□□ -1.41
ATM-228ENST00000639240 LOC102724428A0A0B4J2F2 783 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 NOS3P29474 1203 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 SIK1P57059 783 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 PCSK7Q16549 785 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 C16orf46Q6P387 395 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 WFDC12Q8WWY7 111 aa6.21□□□□□ -1.42
ATM-228ENST00000639240 NSUN5Q96P11 429 aaKnown RBP6.21□□□□□ -1.42
ATM-228ENST00000639240 DLL1O00548 723 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 H2AFB1P0C5Y9 115 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 H2AFB2P0C5Z0 115 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
ATM-228ENST00000639240 EIF2AK2P19525 551 aaKnown RBP6.2□□□□□ -1.42
ATM-228ENST00000639240 IREB2P48200 963 aaKnown RBP6.2□□□□□ -1.42
ATM-228ENST00000639240 WFDC8Q8IUA0 241 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 DTWD1Q8N5C7 304 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 TP53INP1Q96A56 240 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 COL26A1Q96A83 441 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 PLD4Q96BZ4 506 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 MEGF10Q96KG7 1140 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATM-228ENST00000639240 USP21Q9UK80 565 aa6.2□□□□□ -1.42
ATM-228ENST00000639240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.2□□□□□ -1.42
ATM-228ENST00000639240 ALX3O95076 343 aa6.19□□□□□ -1.42
ATM-228ENST00000639240 SCNN1AP37088 669 aa6.19□□□□□ -1.42
ATM-228ENST00000639240 CLP1Q92989 425 aaKnown RBP6.19□□□□□ -1.42
ATM-228ENST00000639240 TRIM33Q9UPN9 1127 aa6.19□□□□□ -1.42
ATM-228ENST00000639240 CARNS1A5YM72 827 aa6.18□□□□□ -1.42
ATM-228ENST00000639240 TM4SF5O14894 197 aa6.18□□□□□ -1.42
ATM-228ENST00000639240 BRD2P25440 801 aaKnown RBP6.18□□□□□ -1.42
ATM-228ENST00000639240 SETDB1Q15047 1291 aa6.18□□□□□ -1.42
ATM-228ENST00000639240 GDF6Q6KF10 455 aaPredicted RBP6.18□□□□□ -1.42
ATM-228ENST00000639240 IGF2-ASQ6U949 168 aa6.18□□□□□ -1.42
ATM-228ENST00000639240 SEPT3Q9UH03 358 aa6.18□□□□□ -1.42
ATM-228ENST00000639240 TMEM88BA6NKF7 163 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 PSAPP07602 524 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 SOX18P35713 384 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 NLRP13Q86W25 1043 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 IL22RA1Q8N6P7 574 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 GOLGA2P5Q9HBQ8 144 aa6.17□□□□□ -1.42
ATM-228ENST00000639240 CYP2E1P05181 493 aaPredicted RBP6.16□□□□□ -1.42
ATM-228ENST00000639240 ZAP70P43403 619 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 ATP11AP98196 1134 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 ARTNQ5T4W7 220 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 OR13H1Q8NG92 308 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 GPR152Q8TDT2 470 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
ATM-228ENST00000639240 UBAP1LF5GYI3 381 aa6.15□□□□□ -1.42
ATM-228ENST00000639240 ATCAYQ86WG3 371 aa6.15□□□□□ -1.42
ATM-228ENST00000639240 DZIP1LQ8IYY4 767 aaKnown RBP6.15□□□□□ -1.42
ATM-228ENST00000639240 GALNT11Q8NCW6 608 aa6.15□□□□□ -1.42
ATM-228ENST00000639240 GHRHP01286 108 aa6.14□□□□□ -1.43
ATM-228ENST00000639240 AGGF1Q8N302 714 aaeCLIP6.14□□□□□ -1.43
ATM-228ENST00000639240 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
ATM-228ENST00000639240 STIM2Q9P246 746 aa6.14□□□□□ -1.43
ATM-228ENST00000639240 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 F8W735 103 aaPredicted RBP6.13□□□□□ -1.43
ATM-228ENST00000639240 PTCD1O75127 700 aaKnown RBP6.13□□□□□ -1.43
ATM-228ENST00000639240 WISP1O95388 367 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 TMEM130Q8N3G9 435 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 RETREG2Q8NC44 543 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 KCNK4Q9NYG8 393 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 TMEM63CQ9P1W3 806 aa6.13□□□□□ -1.43
ATM-228ENST00000639240 LINC01387J3KSC0 135 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 HYAL3O43820 417 aaPredicted RBP6.12□□□□□ -1.43
ATM-228ENST00000639240 KIF4AO95239 1232 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 SSFA2P28290 1259 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 ARID4AP29374 1257 aaPredicted RBP6.12□□□□□ -1.43
ATM-228ENST00000639240 TXNDC11Q6PKC3 985 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 PRR23CQ6ZRP0 262 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 CEP120Q8N960 986 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 RASSF4Q9H2L5 321 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 AKTIPQ9H8T0 292 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 ZFP64Q9NPA5 681 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 CNTN3Q9P232 1028 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 USTQ9Y2C2 406 aa6.12□□□□□ -1.43
ATM-228ENST00000639240 ACPPP15309 386 aa6.11□□□□□ -1.43
ATM-228ENST00000639240 Q6ZS46 218 aa6.11□□□□□ -1.43
ATM-228ENST00000639240 UBL7Q96S82 380 aaPredicted RBP6.11□□□□□ -1.43
ATM-228ENST00000639240 LACRTQ9GZZ8 138 aa6.11□□□□□ -1.43
ATM-228ENST00000639240 GGNBP2Q9H3C7 697 aa6.11□□□□□ -1.43
ATM-228ENST00000639240 A6NHS1 94 aa6.1□□□□□ -1.43
ATM-228ENST00000639240 CEP135Q66GS9 1140 aa6.1□□□□□ -1.43
ATM-228ENST00000639240 PHLDB3Q6NSJ2 640 aa6.1□□□□□ -1.43
ATM-228ENST00000639240 NUDT16Q96DE0 195 aaKnown RBP6.1□□□□□ -1.43
ATM-228ENST00000639240 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
ATM-228ENST00000639240 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
ATM-228ENST00000639240 SH2B1Q9NRF2 756 aaPredicted RBP6.1□□□□□ -1.43
ATM-228ENST00000639240 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
ATM-228ENST00000639240 PPME1Q9Y570 386 aa6.1□□□□□ -1.43
ATM-228ENST00000639240 NFKBIEO00221 500 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 TRPA1O75762 1119 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 EPHA1P21709 976 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 CDC25BP30305 580 aa6.09□□□□□ -1.43
ATM-228ENST00000639240 HYAL2Q12891 473 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms