RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	ISCA1	Q9BUE6	129 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	ELP1	O95163	1332 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	MYH7	P12883	1935 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	EYA2	O00167	538 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	FIBP	O43427	364 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	ZNF500	O60304	480 aa	Predicted RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	CYP21A2	P08686	494 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	MCM5	P33992	734 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	LARP1B	Q659C4	914 aa	Known RBP	10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	NEK1	Q96PY6	1258 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	HELLS	Q9NRZ9	838 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	FBXO3	Q9UK99	471 aa		10.19	□□□□□ -0.78
STRADA-233	ENST00000638888	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	ANKRD36C	Q5JPF3	1778 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	A1BG	P04217	495 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	TRIM28	Q13263	835 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	CDC37L1	Q7L3B6	337 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	GTF3C6	Q969F1	213 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	DSCC1	Q9BVC3	393 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	PLA2G12B	Q9BX93	195 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	ZKSCAN5	Q9Y2L8	839 aa		10.18	□□□□□ -0.78
STRADA-233	ENST00000638888	MYH3	P11055	1940 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	DDX60	Q8IY21	1712 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	LRP6	O75581	1613 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	MSN	P26038	577 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	KRT85	P78386	507 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	ZMYM1	Q5SVZ6	1142 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	CCDC129	Q6ZRS4	1044 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	DDX46	Q7L014	1031 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	TCEANC2	Q96MN5	208 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	SEC62	Q99442	399 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	DNAJC2	Q99543	621 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	AGXT2	Q9BYV1	514 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	PAG1	Q9NWQ8	432 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	NDUFB9	Q9Y6M9	179 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	PLCH1	Q4KWH8	1693 aa		10.17	□□□□□ -0.78
STRADA-233	ENST00000638888	VPS37C	A5D8V6	355 aa	Predicted RBP	10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	CHGB	P05060	677 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	TCIRG1	Q13488	830 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	TTC6	Q86TZ1	520 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	RNF214	Q8ND24	703 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	CCDC39	Q9UFE4	941 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	NWD2	Q9ULI1	1742 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	ROBO1	Q9Y6N7	1651 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	HMGB1	P09429	215 aa	Known RBP	10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	LRRC24	Q50LG9	513 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	STOX1	Q6ZVD7	989 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	SMARCC2	Q8TAQ2	1214 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	ZBTB3	Q9H5J0	574 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	CHMP3	Q9Y3E7	222 aa		10.16	□□□□□ -0.78
STRADA-233	ENST00000638888	AKAP11	Q9UKA4	1901 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	WNK3	Q9BYP7	1800 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	DISP2	A7MBM2	1401 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	ABCC12	Q96J65	1359 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888		A0A1B0GUL7	405 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	TIMM10	P62072	90 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	EXOSC10	Q01780	885 aa	Known RBP	10.15	□□□□□ -0.78
STRADA-233	ENST00000638888		Q6ZUG5	572 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	MTERF4	Q7Z6M4	381 aa	Known RBP	10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	FBXL16	Q8N461	479 aa		10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	LLPH	Q9BRT6	129 aa	Known RBP	10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.15	□□□□□ -0.78
STRADA-233	ENST00000638888	CDHR2	Q9BYE9	1310 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	GOLIM4	O00461	696 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	PFKFB2	O60825	505 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	DTNB	O60941	627 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	PCCA	P05165	728 aa	Predicted RBP	10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	CSF1R	P07333	972 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	DHX32	Q7L7V1	743 aa	Known RBP	10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	NUP98	P52948	1817 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	COL14A1	Q05707	1796 aa	Known RBP	10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	MAST3	O60307	1309 aa		10.14	□□□□□ -0.79
STRADA-233	ENST00000638888	RNF113A	O15541	343 aa	Known RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	IFIT1	P09914	478 aa	Known RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	HSPD1	P10809	573 aa	Known RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	HCLS1	P14317	486 aa	Predicted RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	SCRN1	Q12765	414 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	REST	Q13127	1097 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	ZNF594	Q96JF6	807 aa	Predicted RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	NEUROD6	Q96NK8	337 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	PUS3	Q9BZE2	481 aa	Known RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	TMOD3	Q9NYL9	352 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	ARAP2	Q8WZ64	1704 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	JAK2	O60674	1132 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	RBM43	Q6ZSC3	357 aa	Known RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	CEP126	Q9P2H0	1117 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	AKAP2	Q9Y2D5	859 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	LRP5	O75197	1615 aa		10.13	□□□□□ -0.79
STRADA-233	ENST00000638888	RIC1	Q4ADV7	1423 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	MAP3K15	Q6ZN16	1313 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	SALL1	Q9NSC2	1324 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	DYNC1I1	O14576	645 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	ZFY	P08048	801 aa	Predicted RBP	10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	EVC	P57679	992 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	STK3	Q13188	491 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	CCDC57	Q2TAC2	916 aa		10.12	□□□□□ -0.79
STRADA-233	ENST00000638888	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms