RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 GRM8O00222 908 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 TOMM70O94826 608 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 VEGFAP15692 232 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-214ENST00000638843 FOXO4P98177 505 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 SUPT20HQ8NEM7 779 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 C9orf78Q9NZ63 289 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-214ENST00000638843 POLLQ9UGP5 575 aa12.07□□□□□ -0.48
SCARB2-214ENST00000638843 NOB1Q9ULX3 412 aaKnown RBP12.07□□□□□ -0.48
SCARB2-214ENST00000638843 DDX60Q8IY21 1712 aaKnown RBP12.07□□□□□ -0.48
SCARB2-214ENST00000638843 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
SCARB2-214ENST00000638843 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-214ENST00000638843 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
SCARB2-214ENST00000638843 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
SCARB2-214ENST00000638843 VPS33BQ9H267 617 aa12.06□□□□□ -0.48
SCARB2-214ENST00000638843 WTIPA6NIX2 430 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-214ENST00000638843 ITGA6P23229 1130 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-214ENST00000638843 NIM1KQ8IY84 436 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-214ENST00000638843 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-214ENST00000638843 BSDC1Q9NW68 430 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-214ENST00000638843 PODXL2Q9NZ53 605 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 WASHC4Q2M389 1173 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 LMBR1LQ6UX01 489 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 GPC2Q8N158 579 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 ZNRF3Q9ULT6 936 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
SCARB2-214ENST00000638843 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 ZBED9Q6R2W3 1325 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 LAMB2P55268 1798 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 GALR2O43603 387 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-214ENST00000638843 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
SCARB2-214ENST00000638843 CXCL9Q07325 125 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-214ENST00000638843 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 USP44Q9H0E7 712 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 UTYO14607 1347 aa12.04□□□□□ -0.48
SCARB2-214ENST00000638843 DUOX1Q9NRD9 1551 aa12.03□□□□□ -0.48
SCARB2-214ENST00000638843 YDJCA8MPS7 323 aa12.03□□□□□ -0.48
SCARB2-214ENST00000638843 BCAR3O75815 825 aa12.03□□□□□ -0.48
SCARB2-214ENST00000638843 UFL1O94874 794 aa12.03□□□□□ -0.48
SCARB2-214ENST00000638843 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
SCARB2-214ENST00000638843 CHMP3Q9Y3E7 222 aa12.03□□□□□ -0.48
SCARB2-214ENST00000638843 ANKRD18BA2A2Z9 1011 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 IGHMBP2P38935 993 aaKnown RBP12.02□□□□□ -0.49
SCARB2-214ENST00000638843 IFIT5Q13325 482 aaKnown RBP12.02□□□□□ -0.49
SCARB2-214ENST00000638843 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 XDHP47989 1333 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 TAF1P21675 1872 aa12.02□□□□□ -0.49
SCARB2-214ENST00000638843 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 RAD17O75943 681 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 ZNF594Q96JF6 807 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 EYA3Q99504 573 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 MPHOSPH8Q99549 860 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 API5Q9BZZ5 524 aaKnown RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 ZC3H12CQ9C0D7 883 aaKnown RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 BICC1Q9H694 974 aaKnown RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 DBNDD1Q9H9R9 158 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
SCARB2-214ENST00000638843 SCNN1DP51172 638 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 ANKRD44Q8N8A2 993 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
SCARB2-214ENST00000638843 ECE2O60344 883 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 HSPA6P17066 643 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 ATP2B4P23634 1241 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 EPHX2P34913 555 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 EPS15P42566 896 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 FSTL1Q12841 308 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 CCDC57Q2TAC2 916 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 RABL6Q3YEC7 729 aaPredicted RBP12□□□□□ -0.49
SCARB2-214ENST00000638843 CIAPIN1Q6FI81 312 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
SCARB2-214ENST00000638843 TNNQ9UQP3 1299 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 KIF16BQ96L93 1317 aa12□□□□□ -0.49
SCARB2-214ENST00000638843 SNAP23O00161 211 aa11.99□□□□□ -0.49
SCARB2-214ENST00000638843 TRIM27P14373 513 aa11.99□□□□□ -0.49
SCARB2-214ENST00000638843 CHRNDQ07001 517 aa11.99□□□□□ -0.49
SCARB2-214ENST00000638843 SMC1BQ8NDV3 1235 aa11.99□□□□□ -0.49
SCARB2-214ENST00000638843 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
SCARB2-214ENST00000638843 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
SCARB2-214ENST00000638843 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 WDR90Q96KV7 1748 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 PSMD14O00487 310 aa11.98□□□□□ -0.49
SCARB2-214ENST00000638843 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms