RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
SCN8A-215ENST00000638820 NMIQ13287 307 aaPredicted RBP16.03■□□□□ 0.16
SCN8A-215ENST00000638820 FAM227BQ96M60 508 aa16.03■□□□□ 0.16
SCN8A-215ENST00000638820 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
SCN8A-215ENST00000638820 NEK4P51957 841 aa16.03■□□□□ 0.16
SCN8A-215ENST00000638820 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.16
SCN8A-215ENST00000638820 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
SCN8A-215ENST00000638820 ZKSCAN1P17029 563 aaPredicted RBP16.02■□□□□ 0.15
SCN8A-215ENST00000638820 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.15
SCN8A-215ENST00000638820 MSL1Q68DK7 614 aa16.02■□□□□ 0.15
SCN8A-215ENST00000638820 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.15
SCN8A-215ENST00000638820 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.15
SCN8A-215ENST00000638820 RIPOR2Q9Y4F9 1068 aa16.02■□□□□ 0.15
SCN8A-215ENST00000638820 MROH5Q6ZUA9 1318 aa16.02■□□□□ 0.15
SCN8A-215ENST00000638820 RABEP1Q15276 862 aa16.01■□□□□ 0.15
SCN8A-215ENST00000638820 SSFA2P28290 1259 aa16.01■□□□□ 0.15
SCN8A-215ENST00000638820 RPS8P62241 208 aaKnown RBP16.01■□□□□ 0.15
SCN8A-215ENST00000638820 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
SCN8A-215ENST00000638820 SGSM2O43147 1006 aa16.01■□□□□ 0.15
SCN8A-215ENST00000638820 SERPINB2P05120 415 aa16.01■□□□□ 0.15
SCN8A-215ENST00000638820 LPIN2Q92539 896 aa16.01■□□□□ 0.15
SCN8A-215ENST00000638820 UPF3BQ9BZI7 483 aaKnown RBP16.01■□□□□ 0.15
SCN8A-215ENST00000638820 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
SCN8A-215ENST00000638820 BTAF1O14981 1849 aa16■□□□□ 0.15
SCN8A-215ENST00000638820 TNKS1BP1Q9C0C2 1729 aaKnown RBP16■□□□□ 0.15
SCN8A-215ENST00000638820 FGD1P98174 961 aa16■□□□□ 0.15
SCN8A-215ENST00000638820 CHRNDQ07001 517 aa16■□□□□ 0.15
SCN8A-215ENST00000638820 ABCF2Q9UG63 623 aa16■□□□□ 0.15
SCN8A-215ENST00000638820 HAUS7Q99871 368 aa16■□□□□ 0.15
SCN8A-215ENST00000638820 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
SCN8A-215ENST00000638820 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
SCN8A-215ENST00000638820 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
SCN8A-215ENST00000638820 NUP98P52948 1817 aa15.99■□□□□ 0.15
SCN8A-215ENST00000638820 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
SCN8A-215ENST00000638820 KBTBD3Q8NAB2 608 aa15.99■□□□□ 0.15
SCN8A-215ENST00000638820 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
SCN8A-215ENST00000638820 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCN8A-215ENST00000638820 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
SCN8A-215ENST00000638820 APPP05067 770 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 ZAP70P43403 619 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 CARMIL3Q8ND23 1372 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 TJP1Q07157 1748 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 PHKA1P46020 1223 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 C3orf67Q6ZVT6 689 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 GYS1P13807 737 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 STK32BQ9NY57 414 aa15.98■□□□□ 0.15
SCN8A-215ENST00000638820 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 UQCRFS1P1P0C7P4 283 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 BAG6P46379 1132 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 CCDC102BQ68D86 513 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
SCN8A-215ENST00000638820 PLSCR1O15162 318 aa15.96■□□□□ 0.15
SCN8A-215ENST00000638820 PROM2Q8N271 834 aa15.96■□□□□ 0.15
SCN8A-215ENST00000638820 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.15
SCN8A-215ENST00000638820 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
SCN8A-215ENST00000638820 FLAD1Q8NFF5 587 aa15.96■□□□□ 0.15
SCN8A-215ENST00000638820 SEC62Q99442 399 aaKnown RBP15.96■□□□□ 0.15
SCN8A-215ENST00000638820 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
SCN8A-215ENST00000638820 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
SCN8A-215ENST00000638820 CHAF1AQ13111 956 aaPredicted RBP15.96■□□□□ 0.15
SCN8A-215ENST00000638820 BCAMP50895 628 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 IL25Q9H293 177 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 EZH2Q15910 746 aaKnown RBP15.95■□□□□ 0.14
SCN8A-215ENST00000638820 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 G3V3G9 751 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 SLC9C2Q5TAH2 1124 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
SCN8A-215ENST00000638820 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
SCN8A-215ENST00000638820 RBM8AQ9Y5S9 174 aaKnown RBP15.95■□□□□ 0.14
SCN8A-215ENST00000638820 MMP10P09238 476 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 GYG1P46976 350 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 SCARF1Q14162 830 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 ZSCAN25Q6NSZ9 544 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
SCN8A-215ENST00000638820 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 NUP188Q5SRE5 1749 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
SCN8A-215ENST00000638820 CHGBP05060 677 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
SCN8A-215ENST00000638820 ZNF827Q17R98 1081 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 SLFNL1Q499Z3 407 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 CCDC171Q6TFL3 1326 aa15.94■□□□□ 0.14
SCN8A-215ENST00000638820 PTH1RQ03431 593 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
SCN8A-215ENST00000638820 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCN8A-215ENST00000638820 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
SCN8A-215ENST00000638820 RGS17Q9UGC6 210 aaPredicted RBP15.93■□□□□ 0.14
SCN8A-215ENST00000638820 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 RAD50Q92878 1312 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 RNF113AO15541 343 aaKnown RBP15.93■□□□□ 0.14
SCN8A-215ENST00000638820 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
SCN8A-215ENST00000638820 ZNF609O15014 1411 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms