RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ATP5JP18859 108 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
SNIP1-204ENST00000638725 PSME1Q06323 249 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 TFCP2Q12800 502 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 GCKRQ14397 625 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 LRRC8AQ8IWT6 810 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
SNIP1-204ENST00000638725 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
SNIP1-204ENST00000638725 FGD1P98174 961 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
SNIP1-204ENST00000638725 PPFIA3O75145 1194 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 SYCP1Q15431 976 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 SARM1Q6SZW1 724 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 DBNDD2Q9BQY9 259 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
SNIP1-204ENST00000638725 IGSF3O75054 1194 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 CAVIN2O95810 425 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 STX1AQ16623 288 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
SNIP1-204ENST00000638725 NSUN7Q8NE18 718 aaKnown RBP12.82□□□□□ -0.36
SNIP1-204ENST00000638725 ANKRD24Q8TF21 1146 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 CTNNA3Q9UI47 895 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
SNIP1-204ENST00000638725 RFX5P48382 616 aaPredicted RBP12.82□□□□□ -0.36
SNIP1-204ENST00000638725 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
SNIP1-204ENST00000638725 COPS6Q7L5N1 327 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 MRFAP1L1Q96HT8 127 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 COPRSQ9NQ92 184 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
SNIP1-204ENST00000638725 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 PFKFB2O60825 505 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 MCMDC2Q4G0Z9 681 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 ERCC4Q92889 916 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 FEZ1Q99689 392 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 RCOR1Q9UKL0 485 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 BECN2A8MW95 431 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 GCP02774 474 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 FILIP1Q7Z7B0 1213 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 SKILP12757 684 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 CCT2P78371 535 aaKnown RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 CCDC73Q6ZRK6 1079 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 DHX40Q8IX18 779 aaKnown RBP12.81□□□□□ -0.36
SNIP1-204ENST00000638725 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
SNIP1-204ENST00000638725 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 CTAGE5O15320 804 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 RBM6P78332 1123 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 CCZ1BP86790 482 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 HAUS7Q99871 368 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 TRMT1Q9NXH9 659 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
SNIP1-204ENST00000638725 AXIN2Q9Y2T1 843 aa12.8□□□□□ -0.36
SNIP1-204ENST00000638725 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 MYH15Q9Y2K3 1946 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 C5P01031 1676 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 KINO60870 393 aaKnown RBP12.79□□□□□ -0.36
SNIP1-204ENST00000638725 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 DHX32Q7L7V1 743 aaKnown RBP12.79□□□□□ -0.36
SNIP1-204ENST00000638725 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 ENGASEQ8NFI3 743 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 NEMFO60524 1076 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
SNIP1-204ENST00000638725 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNIP1-204ENST00000638725 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
SNIP1-204ENST00000638725 ME1P48163 572 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 FAM160A1Q05DH4 1040 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 ZNF215Q9UL58 517 aaPredicted RBP12.78□□□□□ -0.36
SNIP1-204ENST00000638725 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 KIF20AO95235 890 aa12.78□□□□□ -0.36
SNIP1-204ENST00000638725 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms