RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 GGA1Q9UJY5 639 aa21.3■■□□□ 1
CACNA1A-259ENST00000638114 RTL9Q8NET4 1388 aa21.3■■□□□ 1
CACNA1A-259ENST00000638114 KLRG1Q96E93 195 aa21.29■■□□□ 1
CACNA1A-259ENST00000638114 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
CACNA1A-259ENST00000638114 ZC3H12CQ9C0D7 883 aaKnown RBP21.29■■□□□ 1
CACNA1A-259ENST00000638114 XDHP47989 1333 aa21.29■■□□□ 1
CACNA1A-259ENST00000638114 ECE2O60344 883 aa21.28■■□□□ 1
CACNA1A-259ENST00000638114 DOK7Q18PE1 504 aa21.28■■□□□ 1
CACNA1A-259ENST00000638114 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
CACNA1A-259ENST00000638114 SLC4A10Q6U841 1118 aa21.28■■□□□ 1
CACNA1A-259ENST00000638114 CDCA7LQ96GN5 454 aa21.28■■□□□ 1
CACNA1A-259ENST00000638114 G3V3G9 751 aa21.27■■□□□ 1
CACNA1A-259ENST00000638114 IGHMBP2P38935 993 aaKnown RBP21.27■■□□□ 1
CACNA1A-259ENST00000638114 FAM161AQ3B820 660 aa21.27■■□□□ 1
CACNA1A-259ENST00000638114 DCAF8Q5TAQ9 597 aa21.27■■□□□ 1
CACNA1A-259ENST00000638114 USP50Q70EL3 339 aaPredicted RBP21.27■■□□□ 1
CACNA1A-259ENST00000638114 ADARB2Q9NS39 739 aaKnown RBP21.27■■□□□ 1
CACNA1A-259ENST00000638114 BSDC1Q9NW68 430 aaPredicted RBP21.27■■□□□ 1
CACNA1A-259ENST00000638114 PASKQ96RG2 1323 aa21.27■□□□□ 0.99
CACNA1A-259ENST00000638114 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
CACNA1A-259ENST00000638114 ITGA6P23229 1130 aa21.26■□□□□ 0.99
CACNA1A-259ENST00000638114 CNTROBQ8N137 903 aa21.26■□□□□ 0.99
CACNA1A-259ENST00000638114 MRPL50Q8N5N7 158 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-259ENST00000638114 PSMD14O00487 310 aa21.25■□□□□ 0.99
CACNA1A-259ENST00000638114 CSF1RP07333 972 aa21.25■□□□□ 0.99
CACNA1A-259ENST00000638114 ATP2B4P23634 1241 aa21.25■□□□□ 0.99
CACNA1A-259ENST00000638114 CREBZFQ9NS37 354 aa21.25■□□□□ 0.99
CACNA1A-259ENST00000638114 MINPP1Q9UNW1 487 aa21.25■□□□□ 0.99
CACNA1A-259ENST00000638114 GRM8O00222 908 aa21.24■□□□□ 0.99
CACNA1A-259ENST00000638114 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
CACNA1A-259ENST00000638114 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
CACNA1A-259ENST00000638114 C9orf78Q9NZ63 289 aaPredicted RBP21.24■□□□□ 0.99
CACNA1A-259ENST00000638114 ZBTB12Q9Y330 459 aaPredicted RBP21.24■□□□□ 0.99
CACNA1A-259ENST00000638114 SSH1Q8WYL5 1049 aa21.23■□□□□ 0.99
CACNA1A-259ENST00000638114 MPHOSPH8Q99549 860 aa21.23■□□□□ 0.99
CACNA1A-259ENST00000638114 KCNQ5Q9NR82 932 aa21.23■□□□□ 0.99
CACNA1A-259ENST00000638114 CNOT7Q9UIV1 285 aaKnown RBP21.23■□□□□ 0.99
CACNA1A-259ENST00000638114 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
CACNA1A-259ENST00000638114 ANKRD18BA2A2Z9 1011 aa21.22■□□□□ 0.99
CACNA1A-259ENST00000638114 FOXO4P98177 505 aa21.22■□□□□ 0.99
CACNA1A-259ENST00000638114 MICALL2Q8IY33 904 aa21.22■□□□□ 0.99
CACNA1A-259ENST00000638114 SCN9AQ15858 1988 aa21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 H7C1D1 291 aa21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 CCT4P50991 539 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 PTPRCP08575 1304 aa21.21■□□□□ 0.99
CACNA1A-259ENST00000638114 WTIPA6NIX2 430 aaPredicted RBP21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 TMEM88BA6NKF7 163 aa21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 IFIT5Q13325 482 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 TRMT2AQ8IZ69 625 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 TRPM4Q8TD43 1214 aa21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 DPF2Q92785 391 aa21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 MKRN1Q9UHC7 482 aaKnown RBP21.2■□□□□ 0.98
CACNA1A-259ENST00000638114 RPS12P25398 132 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 ALDH1L2Q3SY69 923 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 EPHA10Q5JZY3 1008 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 LMBR1LQ6UX01 489 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 SMC4Q9NTJ3 1288 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 MED23Q9ULK4 1368 aa21.19■□□□□ 0.98
CACNA1A-259ENST00000638114 MIER1Q8N108 512 aa21.18■□□□□ 0.98
CACNA1A-259ENST00000638114 LEMD3Q9Y2U8 911 aa21.18■□□□□ 0.98
CACNA1A-259ENST00000638114 VIL1P09327 827 aaKnown RBP21.17■□□□□ 0.98
CACNA1A-259ENST00000638114 HIRAP54198 1017 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-259ENST00000638114 CCDC57Q2TAC2 916 aa21.17■□□□□ 0.98
CACNA1A-259ENST00000638114 ZNF804BA4D1E1 1349 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 TRAF5O00463 557 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 KCNJ4P48050 445 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 FMR1Q06787 632 aaKnown RBP eCLIP21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 CHRNDQ07001 517 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 TBC1D10BQ4KMP7 808 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 TAF7LQ5H9L4 462 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 SAMD7Q7Z3H4 446 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 PODNQ7Z5L7 613 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 SUCLG2Q96I99 432 aa21.16■□□□□ 0.98
CACNA1A-259ENST00000638114 PSME4Q14997 1843 aa21.15■□□□□ 0.98
CACNA1A-259ENST00000638114 CNTNAP1P78357 1384 aa21.15■□□□□ 0.98
CACNA1A-259ENST00000638114 CT47B1P0C2W7 299 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-259ENST00000638114 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-259ENST00000638114 ZC3H15Q8WU90 426 aaKnown RBP21.15■□□□□ 0.98
CACNA1A-259ENST00000638114 USP17L3A6NCW0 530 aa21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 USP17L4A6NCW7 530 aa21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 RSBN1LQ6PCB5 846 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 USP17L1Q7RTZ2 530 aa21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 ZNF594Q96JF6 807 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 GLIS2Q9BZE0 524 aaPredicted RBP21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 PGAP2Q9UHJ9 254 aa21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 ABT1Q9ULW3 272 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-259ENST00000638114 UTYO14607 1347 aa21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 KLRK1P26718 216 aa21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 TXNRD3Q86VQ6 643 aa21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 HELBQ8NG08 1087 aaPredicted RBP21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 COA1Q9GZY4 146 aa21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 TRPM7Q96QT4 1865 aa21.13■□□□□ 0.97
CACNA1A-259ENST00000638114 TAF5LO75529 589 aa21.12■□□□□ 0.97
CACNA1A-259ENST00000638114 EGFRP00533 1210 aa21.12■□□□□ 0.97
CACNA1A-259ENST00000638114 KIF4BQ2VIQ3 1234 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms