RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 AGERQ15109 404 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 C1QTNF2Q9BXJ5 285 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 SCTRP47872 440 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 C19orf44Q9H6X5 657 aa16.42■□□□□ 0.22
CACNA1A-244ENST00000637625 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
CACNA1A-244ENST00000637625 FOXO3O43524 673 aa16.41■□□□□ 0.22
CACNA1A-244ENST00000637625 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
CACNA1A-244ENST00000637625 MTRQ99707 1265 aa16.41■□□□□ 0.22
CACNA1A-244ENST00000637625 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 LTN1O94822 1766 aa16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 MST1RQ04912 1400 aa16.4■□□□□ 0.22
CACNA1A-244ENST00000637625 ATF3P18847 181 aa16.39■□□□□ 0.22
CACNA1A-244ENST00000637625 USP4Q13107 963 aa16.39■□□□□ 0.22
CACNA1A-244ENST00000637625 RNF20Q5VTR2 975 aa16.39■□□□□ 0.22
CACNA1A-244ENST00000637625 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-244ENST00000637625 THSD4Q6ZMP0 1018 aa16.39■□□□□ 0.21
CACNA1A-244ENST00000637625 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-244ENST00000637625 STAU1O95793 577 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-244ENST00000637625 RECKO95980 971 aa16.38■□□□□ 0.21
CACNA1A-244ENST00000637625 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
CACNA1A-244ENST00000637625 DCTN4Q9UJW0 460 aa16.38■□□□□ 0.21
CACNA1A-244ENST00000637625 AMPHP49418 695 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 SLC6A16Q9GZN6 736 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 RGPD1P0DJD0 1748 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 FLT4P35916 1363 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 PLIN1O60240 522 aa16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 NAA30Q147X3 362 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-244ENST00000637625 MSH6P52701 1360 aa16.36■□□□□ 0.21
CACNA1A-244ENST00000637625 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-244ENST00000637625 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
CACNA1A-244ENST00000637625 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
CACNA1A-244ENST00000637625 DCCP43146 1447 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 NEFMP07197 916 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 RIPK4P57078 832 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 VAMP1P23763 118 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 RAB15P59190 212 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-244ENST00000637625 TMEM229AB2RXF0 380 aa16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 SH3BP2P78314 561 aa16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 LCE2DQ5TA82 110 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 ZNF358Q9NW07 568 aa16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 NFAT5O94916 1531 aa16.34■□□□□ 0.21
CACNA1A-244ENST00000637625 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.21
CACNA1A-244ENST00000637625 M0R2N6 131 aa16.33■□□□□ 0.2
CACNA1A-244ENST00000637625 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.2
CACNA1A-244ENST00000637625 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
CACNA1A-244ENST00000637625 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
CACNA1A-244ENST00000637625 NCOA3Q9Y6Q9 1424 aa16.32■□□□□ 0.2
CACNA1A-244ENST00000637625 SEPT12Q8IYM1 358 aa16.32■□□□□ 0.2
CACNA1A-244ENST00000637625 NKX2-3Q8TAU0 364 aa16.32■□□□□ 0.2
CACNA1A-244ENST00000637625 LTV1Q96GA3 475 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-244ENST00000637625 S1PR4O95977 384 aa16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 HOXC9P31274 260 aa16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
CACNA1A-244ENST00000637625 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-244ENST00000637625 SLIT3O75094 1523 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 POTEMA6NI47 508 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 SCNN1DP51172 638 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
CACNA1A-244ENST00000637625 BCAR3O75815 825 aa16.28■□□□□ 0.2
CACNA1A-244ENST00000637625 RGL4Q8IZJ4 473 aa16.28■□□□□ 0.2
CACNA1A-244ENST00000637625 KCTD15Q96SI1 283 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-244ENST00000637625 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
CACNA1A-244ENST00000637625 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
CACNA1A-244ENST00000637625 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
CACNA1A-244ENST00000637625 FAM163AQ96GL9 167 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-244ENST00000637625 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-244ENST00000637625 RTL1A6NKG5 1358 aa16.27■□□□□ 0.19
CACNA1A-244ENST00000637625 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.19
CACNA1A-244ENST00000637625 FAM83GA6ND36 823 aa16.27■□□□□ 0.19
CACNA1A-244ENST00000637625 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-244ENST00000637625 INTS6LQ5JSJ4 861 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-244ENST00000637625 ERVH48-1M5A8F1 160 aa16.26■□□□□ 0.19
CACNA1A-244ENST00000637625 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms