RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 MYCBPQ99417 103 aaPredicted RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 PAIP2Q9BPZ3 127 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 FAM13BQ9NYF5 915 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 PES1O00541 588 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 NAP1L1P55209 391 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 NUDT16Q96DE0 195 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 PPCSQ9HAB8 311 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 ABCC6O95255 1503 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 CPDO75976 1380 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 ERICH4A6NGS2 130 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 PRMT3O60678 531 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 DHX8Q14562 1220 aaKnown RBP9.3□□□□□ -0.92
CLN5-217ENST00000637278 PUS10Q3MIT2 529 aaKnown RBP9.3□□□□□ -0.92
CLN5-217ENST00000637278 RBM28Q9NW13 759 aaKnown RBP9.3□□□□□ -0.92
CLN5-217ENST00000637278 FCHSD2O94868 740 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 PAX7P23759 505 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 KANK3Q6NY19 840 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 LMO7Q8WWI1 1683 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
CLN5-217ENST00000637278 GOLGA6L3A6NEY3 463 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 ZNF853P0CG23 659 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 MKL1Q969V6 931 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 MAGEC2Q9UBF1 373 aaPredicted RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 SPATA31A5Q5VU36 1347 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 SPATA31A7Q8IWB4 1347 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 SCAMP3O14828 347 aaKnown RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 LONRF1Q17RB8 773 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 CDK19Q9BWU1 502 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 SMC4Q9NTJ3 1288 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 PUF60Q9UHX1 559 aaKnown RBP9.29□□□□□ -0.92
CLN5-217ENST00000637278 USP19O94966 1318 aa9.29□□□□□ -0.92
CLN5-217ENST00000637278 SLIT3O75094 1523 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 RPAINQ86UA6 219 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 OSBPL2Q9H1P3 480 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 PRDM11Q9NQV5 511 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 FEZ2Q9UHY8 353 aaPredicted RBP9.28□□□□□ -0.92
CLN5-217ENST00000637278 DIS3Q9Y2L1 958 aaKnown RBP9.28□□□□□ -0.92
CLN5-217ENST00000637278 PARD3Q8TEW0 1356 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 PPIP5K1Q6PFW1 1433 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
CLN5-217ENST00000637278 AKAP12Q02952 1782 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 RACK1P63244 317 aaKnown RBP9.28□□□□□ -0.92
CLN5-217ENST00000637278 TOMM20Q15388 145 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
CLN5-217ENST00000637278 MOXD2PA6NHM9 499 aa9.27□□□□□ -0.92
CLN5-217ENST00000637278 HLA-CQ95604 372 aa9.27□□□□□ -0.92
CLN5-217ENST00000637278 BTG4Q9NY30 223 aa9.27□□□□□ -0.92
CLN5-217ENST00000637278 PARP4Q9UKK3 1724 aaKnown RBP9.27□□□□□ -0.92
CLN5-217ENST00000637278 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.92
CLN5-217ENST00000637278 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
CLN5-217ENST00000637278 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 SMAPO00193 183 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 COQ9O75208 318 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 VAMP1P23763 118 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 BAG6P46379 1132 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 CCSER2Q9H7U1 834 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 PTPRHQ9HD43 1115 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.93
CLN5-217ENST00000637278 UVSSAQ2YD98 709 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 ENOX1Q8TC92 643 aaKnown RBP9.26□□□□□ -0.93
CLN5-217ENST00000637278 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 ACEP12821 1306 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 EVC2Q86UK5 1308 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 MAP3K7O43318 606 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 PRC1O43663 620 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 NLRP6P59044 892 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 ECM1Q16610 540 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
CLN5-217ENST00000637278 NLRP13Q86W25 1043 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 AMOTL1Q8IY63 956 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 USP6P35125 1406 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 SSH2Q76I76 1423 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 KIAA0232Q92628 1395 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 PDGFRBP09619 1106 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 LMNB1P20700 586 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 ARMC3Q5W041 872 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 PRIMPOLQ96LW4 560 aa9.26□□□□□ -0.93
CLN5-217ENST00000637278 CUEDC1Q9NWM3 386 aaPredicted RBP9.26□□□□□ -0.93
CLN5-217ENST00000637278 TPX2Q9ULW0 747 aaKnown RBP9.26□□□□□ -0.93
CLN5-217ENST00000637278 TTC30AQ86WT1 665 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 MCF2L2Q86YR7 1114 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 NCAPGQ9BPX3 1015 aa9.25□□□□□ -0.93
CLN5-217ENST00000637278 SPATA31A1Q5TZJ5 1347 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms