RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 STAP2Q9UGK3 403 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
LINC00643-207ENST00000637212 C2CD5Q86YS7 1000 aa16.45■□□□□ 0.22
LINC00643-207ENST00000637212 PELP1Q8IZL8 1130 aaKnown RBP16.45■□□□□ 0.22
LINC00643-207ENST00000637212 EAF2Q96CJ1 260 aaPredicted RBP16.45■□□□□ 0.22
LINC00643-207ENST00000637212 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
LINC00643-207ENST00000637212 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
LINC00643-207ENST00000637212 RGS3P49796 1198 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 TGFB2P61812 414 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 AACSQ86V21 672 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
LINC00643-207ENST00000637212 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
LINC00643-207ENST00000637212 CHRNDQ07001 517 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.43■□□□□ 0.22
LINC00643-207ENST00000637212 AOX1Q06278 1338 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
LINC00643-207ENST00000637212 MX1P20591 662 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 FGFR2P21802 821 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 PDE1AP54750 535 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
LINC00643-207ENST00000637212 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 LPIN2Q92539 896 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 CD2APQ9Y5K6 639 aa16.42■□□□□ 0.22
LINC00643-207ENST00000637212 PTGER2P43116 358 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 TIMM10P62072 90 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
LINC00643-207ENST00000637212 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC00643-207ENST00000637212 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
LINC00643-207ENST00000637212 ECHDC1Q9NTX5 307 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 C10orf71Q711Q0 1435 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 LAMB2P55268 1798 aa16.41■□□□□ 0.22
LINC00643-207ENST00000637212 A0A1B0GUL7 405 aa16.4■□□□□ 0.22
LINC00643-207ENST00000637212 ERC2O15083 957 aa16.4■□□□□ 0.22
LINC00643-207ENST00000637212 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
LINC00643-207ENST00000637212 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
LINC00643-207ENST00000637212 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
LINC00643-207ENST00000637212 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
LINC00643-207ENST00000637212 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
LINC00643-207ENST00000637212 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
LINC00643-207ENST00000637212 SLC5A1P13866 664 aa16.39■□□□□ 0.21
LINC00643-207ENST00000637212 HELBQ8NG08 1087 aaPredicted RBP16.39■□□□□ 0.21
LINC00643-207ENST00000637212 BCL11AQ9H165 835 aa16.39■□□□□ 0.21
LINC00643-207ENST00000637212 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
LINC00643-207ENST00000637212 TAF5LO75529 589 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 ATP5JP18859 108 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 CHRNA5P30532 468 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 BMP2KLQ5H9B9 411 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 ZNF512BQ96KM6 892 aaPredicted RBP16.38■□□□□ 0.21
LINC00643-207ENST00000637212 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
LINC00643-207ENST00000637212 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
LINC00643-207ENST00000637212 ATP2B4P23634 1241 aa16.37■□□□□ 0.21
LINC00643-207ENST00000637212 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
LINC00643-207ENST00000637212 TTC22Q5TAA0 569 aa16.37■□□□□ 0.21
LINC00643-207ENST00000637212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00643-207ENST00000637212 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
LINC00643-207ENST00000637212 XDHP47989 1333 aa16.37■□□□□ 0.21
LINC00643-207ENST00000637212 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 ZBTB22O15209 634 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 DPEP1P16444 411 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 KCNA3P22001 575 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
LINC00643-207ENST00000637212 TTLL6Q8N841 843 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
LINC00643-207ENST00000637212 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
LINC00643-207ENST00000637212 MYH3P11055 1940 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 TNRC6CQ9HCJ0 1690 aaKnown RBP16.35■□□□□ 0.21
LINC00643-207ENST00000637212 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 KCNJ4P48050 445 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 GPSM2P81274 684 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
LINC00643-207ENST00000637212 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 ZNF609O15014 1411 aa16.35■□□□□ 0.21
LINC00643-207ENST00000637212 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
LINC00643-207ENST00000637212 MPNDQ8N594 471 aa16.34■□□□□ 0.21
LINC00643-207ENST00000637212 GGA1Q9UJY5 639 aa16.34■□□□□ 0.21
LINC00643-207ENST00000637212 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
LINC00643-207ENST00000637212 ADORA1P30542 326 aa16.33■□□□□ 0.2
LINC00643-207ENST00000637212 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
LINC00643-207ENST00000637212 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
LINC00643-207ENST00000637212 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
LINC00643-207ENST00000637212 GNL3LQ9NVN8 582 aaKnown RBP16.33■□□□□ 0.2
LINC00643-207ENST00000637212 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
LINC00643-207ENST00000637212 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms