RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 RPGRQ92834 1020 aaKnown RBP24.35■■□□□ 1.49
CLN8-208ENST00000635751 CELF1Q92879 486 aaKnown RBP24.35■■□□□ 1.49
CLN8-208ENST00000635751 IL1RAPL2Q9NP60 686 aa24.35■■□□□ 1.49
CLN8-208ENST00000635751 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
CLN8-208ENST00000635751 CIAO1O76071 339 aa24.34■■□□□ 1.49
CLN8-208ENST00000635751 POLD1P28340 1107 aa24.34■■□□□ 1.49
CLN8-208ENST00000635751 MPHOSPH8Q99549 860 aa24.34■■□□□ 1.49
CLN8-208ENST00000635751 CNNM1Q9NRU3 951 aa24.34■■□□□ 1.49
CLN8-208ENST00000635751 IGHMBP2P38935 993 aaKnown RBP24.33■■□□□ 1.49
CLN8-208ENST00000635751 IL15P40933 162 aaPredicted RBP24.33■■□□□ 1.49
CLN8-208ENST00000635751 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
CLN8-208ENST00000635751 FBXO3Q9UK99 471 aa24.33■■□□□ 1.49
CLN8-208ENST00000635751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.33■■□□□ 1.49
CLN8-208ENST00000635751 HSCBQ8IWL3 235 aa24.33■■□□□ 1.48
CLN8-208ENST00000635751 RIPOR2Q9Y4F9 1068 aa24.33■■□□□ 1.48
CLN8-208ENST00000635751 CACNA1SQ13698 1873 aa24.32■■□□□ 1.48
CLN8-208ENST00000635751 TFCP2Q12800 502 aa24.32■■□□□ 1.48
CLN8-208ENST00000635751 TTC22Q5TAA0 569 aa24.32■■□□□ 1.48
CLN8-208ENST00000635751 C16orf71Q8IYS4 520 aaPredicted RBP24.32■■□□□ 1.48
CLN8-208ENST00000635751 RBM17Q96I25 401 aaKnown RBP24.32■■□□□ 1.48
CLN8-208ENST00000635751 LRP5O75197 1615 aa24.32■■□□□ 1.48
CLN8-208ENST00000635751 GSPT1P15170 499 aaKnown RBP24.31■■□□□ 1.48
CLN8-208ENST00000635751 RPS8P62241 208 aaKnown RBP24.31■■□□□ 1.48
CLN8-208ENST00000635751 KIF13BQ9NQT8 1826 aa24.31■■□□□ 1.48
CLN8-208ENST00000635751 SRGNP10124 158 aa24.31■■□□□ 1.48
CLN8-208ENST00000635751 GSE1Q14687 1217 aa24.31■■□□□ 1.48
CLN8-208ENST00000635751 HOXA10P31260 410 aaPredicted RBP24.3■■□□□ 1.48
CLN8-208ENST00000635751 SNX21Q969T3 373 aa24.3■■□□□ 1.48
CLN8-208ENST00000635751 SGIP1Q9BQI5 828 aa24.3■■□□□ 1.48
CLN8-208ENST00000635751 C10orf71Q711Q0 1435 aa24.3■■□□□ 1.48
CLN8-208ENST00000635751 GRAPQ13588 217 aa24.29■■□□□ 1.48
CLN8-208ENST00000635751 GRAPLQ8TC17 118 aaPredicted RBP24.29■■□□□ 1.48
CLN8-208ENST00000635751 C2CD5Q86YS7 1000 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 BSDC1Q9NW68 430 aaPredicted RBP24.28■■□□□ 1.48
CLN8-208ENST00000635751 A0A1B0GUL6 1792 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 NPR1P16066 1061 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 PTGER2P43116 358 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 METTL24Q5JXM2 366 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 CLASRPQ8N2M8 674 aaKnown RBP24.28■■□□□ 1.48
CLN8-208ENST00000635751 CRAMP1Q96RY5 1269 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 CEP126Q9P2H0 1117 aa24.28■■□□□ 1.48
CLN8-208ENST00000635751 H0YIN7 160 aa24.27■■□□□ 1.48
CLN8-208ENST00000635751 OTUD7AQ8TE49 926 aaPredicted RBP24.27■■□□□ 1.48
CLN8-208ENST00000635751 CHRNA5P30532 468 aa24.26■■□□□ 1.47
CLN8-208ENST00000635751 HELBQ8NG08 1087 aaPredicted RBP24.26■■□□□ 1.47
CLN8-208ENST00000635751 MASTLQ96GX5 879 aa24.26■■□□□ 1.47
CLN8-208ENST00000635751 EAF2Q96CJ1 260 aaPredicted RBP24.26■■□□□ 1.47
CLN8-208ENST00000635751 MROH5Q6ZUA9 1318 aa24.26■■□□□ 1.47
CLN8-208ENST00000635751 ZNF622Q969S3 477 aaKnown RBP eCLIP24.25■■□□□ 1.47
CLN8-208ENST00000635751 DLEC1Q9Y238 1755 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 CHRNDQ07001 517 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 TNNI3KQ59H18 835 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 AACSQ86V21 672 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 MINPP1Q9UNW1 487 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 FPGT-TNNI3KV9GXZ4 949 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 TAF5LO75529 589 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 ALDH1B1P30837 517 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 VGLL2Q8N8G2 317 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 CCDC8Q9H0W5 538 aaPredicted RBP24.24■■□□□ 1.47
CLN8-208ENST00000635751 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
CLN8-208ENST00000635751 BBOX1O75936 387 aa24.23■■□□□ 1.47
CLN8-208ENST00000635751 PDE8BO95263 885 aa24.23■■□□□ 1.47
CLN8-208ENST00000635751 SPRYD3Q8NCJ5 442 aa24.23■■□□□ 1.47
CLN8-208ENST00000635751 KIF2CQ99661 725 aa24.23■■□□□ 1.47
CLN8-208ENST00000635751 CHMP5Q9NZZ3 219 aa24.23■■□□□ 1.47
CLN8-208ENST00000635751 SLX4Q8IY92 1834 aa24.22■■□□□ 1.47
CLN8-208ENST00000635751 SOCS7O14512 581 aa24.22■■□□□ 1.47
CLN8-208ENST00000635751 TIMM10P62072 90 aa24.22■■□□□ 1.47
CLN8-208ENST00000635751 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
CLN8-208ENST00000635751 GPR108Q9NPR9 543 aa24.22■■□□□ 1.47
CLN8-208ENST00000635751 IFIT2P09913 472 aaKnown RBP24.21■■□□□ 1.47
CLN8-208ENST00000635751 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
CLN8-208ENST00000635751 PPP1R1BQ9UD71 204 aaPredicted RBP24.21■■□□□ 1.47
CLN8-208ENST00000635751 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
CLN8-208ENST00000635751 NEUROD6Q96NK8 337 aa24.21■■□□□ 1.47
CLN8-208ENST00000635751 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
CLN8-208ENST00000635751 SALL3Q9BXA9 1300 aa24.2■■□□□ 1.46
CLN8-208ENST00000635751 A0A0G2JLW4 131 aa24.2■■□□□ 1.46
CLN8-208ENST00000635751 A0A1B0GUL7 405 aa24.2■■□□□ 1.46
CLN8-208ENST00000635751 KLHL34Q8N239 644 aa24.2■■□□□ 1.46
CLN8-208ENST00000635751 TLR7Q9NYK1 1049 aaKnown RBP24.2■■□□□ 1.46
CLN8-208ENST00000635751 SNAP23O00161 211 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 PPEF1O14829 653 aaPredicted RBP24.19■■□□□ 1.46
CLN8-208ENST00000635751 CASC1Q6TDU7 716 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 ZNF609O15014 1411 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 DPEP1P16444 411 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 MX1P20591 662 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 ATP2B3Q16720 1220 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 OSBPL3Q9H4L5 887 aa24.19■■□□□ 1.46
CLN8-208ENST00000635751 SDSP20132 328 aa24.18■■□□□ 1.46
CLN8-208ENST00000635751 PDE1AP54750 535 aa24.18■■□□□ 1.46
CLN8-208ENST00000635751 TSHZ3Q63HK5 1081 aa24.18■■□□□ 1.46
CLN8-208ENST00000635751 DBNLQ9UJU6 430 aaKnown RBP24.18■■□□□ 1.46
CLN8-208ENST00000635751 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
CLN8-208ENST00000635751 TGFB2P61812 414 aa24.17■■□□□ 1.46
CLN8-208ENST00000635751 PUM3Q15397 648 aaKnown RBP24.17■■□□□ 1.46
CLN8-208ENST00000635751 CNKSR1Q969H4 720 aa24.17■■□□□ 1.46
CLN8-208ENST00000635751 DBNDD2Q9BQY9 259 aa24.17■■□□□ 1.46
CLN8-208ENST00000635751 ANKRD2Q9GZV1 360 aa24.17■■□□□ 1.46
CLN8-208ENST00000635751 WTIPA6NIX2 430 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms