RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 XPO4Q9C0E2 1151 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 IL25Q9H293 177 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SALL3Q9BXA9 1300 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SPTLC2O15270 562 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 APPP05067 770 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 ARID5BQ14865 1188 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC191Q8NCU4 936 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 LINS1Q8NG48 757 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SMARCE1Q969G3 411 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 KIF5CO60282 957 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 HOXB7P09629 217 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 TTLL5Q6EMB2 1281 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 UTP14AQ9BVJ6 771 aaKnown RBP9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 MLH3Q9UHC1 1453 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 INO80Q9ULG1 1556 aaPredicted RBP9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SYKP43405 635 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 KRBA2Q6ZNG9 492 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 TMX1Q9H3N1 280 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 TOMM22Q9NS69 142 aa9.7□□□□□ -0.86
SMARCA2-246ENST00000635739 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 IPO7O95373 1038 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 SLFN14P0C7P3 912 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 RBM6P78332 1123 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 APOBRQ0VD83 1088 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC12Q8WUD4 166 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 CDKL5O76039 1030 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 MYL6BP14649 208 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 CWF19L2Q2TBE0 894 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 MPRIPQ6WCQ1 1025 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 GOLGA1Q92805 767 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 PGBD1Q96JS3 809 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 USP28Q96RU2 1077 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 ZC3H13Q5T200 1668 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 PES1O00541 588 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 IVLP07476 585 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 FANCCQ00597 558 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 SETQ01105 290 aaPredicted RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 IMMTQ16891 758 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 BEND3Q5T5X7 828 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 DDX46Q7L014 1031 aaKnown RBP9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 CNNM3Q8NE01 707 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 ZSWIM4Q9H7M6 989 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
SMARCA2-246ENST00000635739 USP27XA6NNY8 438 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 IL17REQ8NFR9 667 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 PPP1R13BQ96KQ4 1090 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 C10orf67Q8IYJ2 551 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 CLCN6P51797 869 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 MYL5Q02045 173 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 PSME1Q06323 249 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 RESTQ13127 1097 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 MCM6Q14566 821 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC102BQ68D86 513 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 EAF2Q96CJ1 260 aaPredicted RBP9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 DEF6Q9H4E7 631 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 PTPRMP28827 1452 aa9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 OAS2P29728 719 aaKnown RBP9.68□□□□□ -0.86
SMARCA2-246ENST00000635739 MROH2AA6NES4 1674 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 EFCAB8A8MWE9 144 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 MYD88Q99836 296 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 GOLIM4O00461 696 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 ATP8B1O43520 1251 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 PNMA6AP0CW24 399 aaPredicted RBP9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 CAPN2P17655 700 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 ATP2B1P20020 1258 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 NLRP12P59046 1061 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 AMOTQ4VCS5 1084 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 NEK11Q8NG66 645 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 IL17RAQ96F46 866 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 BICC1Q9H694 974 aaKnown RBP9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 ARHGAP6O43182 974 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 HNRNPH2P55795 449 aaKnown RBP9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 ZSCAN26Q16670 478 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
SMARCA2-246ENST00000635739 CAMSAP1Q5T5Y3 1602 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC158Q5M9N0 1113 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 CTR9Q6PD62 1173 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms