RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 DDIT3P35638 169 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 RIC1Q4ADV7 1423 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
LIMS4-204ENST00000632897 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
LIMS4-204ENST00000632897 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-204ENST00000632897 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
LIMS4-204ENST00000632897 PALD1Q9ULE6 856 aa17.18■□□□□ 0.34
LIMS4-204ENST00000632897 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
LIMS4-204ENST00000632897 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 CCDC171Q6TFL3 1326 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
LIMS4-204ENST00000632897 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 NTSR2O95665 410 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 HSP90AA1P07900 732 aaKnown RBP17.17■□□□□ 0.34
LIMS4-204ENST00000632897 TIMM10P62072 90 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 LDHAL6AQ6ZMR3 332 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
LIMS4-204ENST00000632897 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
LIMS4-204ENST00000632897 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
LIMS4-204ENST00000632897 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
LIMS4-204ENST00000632897 KCNB2Q92953 911 aa17.16■□□□□ 0.34
LIMS4-204ENST00000632897 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
LIMS4-204ENST00000632897 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
LIMS4-204ENST00000632897 NEK4P51957 841 aa17.15■□□□□ 0.34
LIMS4-204ENST00000632897 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
LIMS4-204ENST00000632897 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
LIMS4-204ENST00000632897 FAM227BQ96M60 508 aa17.15■□□□□ 0.34
LIMS4-204ENST00000632897 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
LIMS4-204ENST00000632897 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
LIMS4-204ENST00000632897 MROH5Q6ZUA9 1318 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 IFIT1P09914 478 aaKnown RBP17.14■□□□□ 0.33
LIMS4-204ENST00000632897 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.33
LIMS4-204ENST00000632897 YY1P25490 414 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 PTGER2P43116 358 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 MAP4K1Q92918 833 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
LIMS4-204ENST00000632897 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 PTH1RQ03431 593 aa17.12■□□□□ 0.33
LIMS4-204ENST00000632897 LRRFIP1Q32MZ4 808 aaKnown RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
LIMS4-204ENST00000632897 POLD1P28340 1107 aa17.12■□□□□ 0.33
LIMS4-204ENST00000632897 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
LIMS4-204ENST00000632897 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
LIMS4-204ENST00000632897 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 GOLIM4O00461 696 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 GNPATO15228 680 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 PDE8BO95263 885 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 ADORA1P30542 326 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
LIMS4-204ENST00000632897 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 HELLSQ9NRZ9 838 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
LIMS4-204ENST00000632897 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
LIMS4-204ENST00000632897 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
LIMS4-204ENST00000632897 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
LIMS4-204ENST00000632897 KCNJ4P48050 445 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 KCNQ4P56696 695 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
LIMS4-204ENST00000632897 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 MPHOSPH8Q99549 860 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 BCL2L12Q9HB09 334 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
LIMS4-204ENST00000632897 ZPR1O75312 459 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 TAF5LO75529 589 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 SSFA2P28290 1259 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 IGHMBP2P38935 993 aaKnown RBP17.09■□□□□ 0.33
LIMS4-204ENST00000632897 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
LIMS4-204ENST00000632897 LPIN2Q92539 896 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 FHDC1Q9C0D6 1143 aaPredicted RBP17.09■□□□□ 0.33
LIMS4-204ENST00000632897 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
LIMS4-204ENST00000632897 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.32
LIMS4-204ENST00000632897 FGFR2P21802 821 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 CUL4AQ13619 759 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 RAB3GAP1Q15042 981 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms