RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 ATP2A1O14983 1001 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 ARID5AQ03989 594 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 CGNQ9P2M7 1197 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 V9GYY5 206 aaPredicted RBP7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 HMGXB3Q12766 1538 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 TMPOP42166 694 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 RAB11FIP4Q86YS3 637 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 CEP112Q8N8E3 955 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 FSIP1Q8NA03 581 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 HAUS2Q9NVX0 235 aa7.31□□□□□ -1.24
SRGAP1-207ENST00000631006 UBE3BQ7Z3V4 1068 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 NME9Q86XW9 330 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PANK2Q9BZ23 570 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 ERICH3Q5RHP9 1530 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 JADE2Q9NQC1 790 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 KIF5AQ12840 1032 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 CNNM2Q9H8M5 875 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 ANKRD2Q9GZV1 360 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 SUPT6HQ7KZ85 1726 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 URI1O94763 535 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 RAB3GAP1Q15042 981 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 TMEM57Q8N5G2 664 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 SELENOOQ9BVL4 669 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 HARSP12081 509 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 ZBTB16Q05516 673 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PRKG1Q13976 671 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PTPN14Q15678 1187 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 FAM200AQ8TCP9 573 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 KIFC2Q96AC6 838 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PKD2L1Q9P0L9 805 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 PRKAG2Q9UGJ0 569 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 GEN1Q17RS7 908 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 RRAGBQ5VZM2 374 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 SLC5A4Q9NY91 659 aa7.3□□□□□ -1.24
SRGAP1-207ENST00000631006 DAPK3O43293 454 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 DZIP3Q86Y13 1208 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 THUMPD2Q9BTF0 503 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 GTPBP4Q9BZE4 634 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 HECW1Q76N89 1606 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 JARID2Q92833 1246 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 NPHP3Q7Z494 1330 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 ATP2A2P16615 1042 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC89Q8N998 374 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 FBF1Q8TES7 1133 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC114Q96M63 670 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CAMSAP2Q08AD1 1489 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 PLEKHH1Q9ULM0 1364 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 TTC21BQ7Z4L5 1316 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 F6X3S4 739 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 ARHGEF6Q15052 776 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC77Q9BR77 488 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 GOLGA6L9A6NEM1 432 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 LDHBP07195 334 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 RTN1Q16799 776 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CFAP157Q5JU67 520 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CTR9Q6PD62 1173 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 TMTC2Q8N394 836 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 NSMCE1Q8WV22 266 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 GINS2Q9Y248 185 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 POTEB2H3BUK9 544 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 GNPATO15228 680 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 MCM5P33992 734 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 ORC3Q9UBD5 711 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 FAM135AQ9P2D6 1515 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 WASLO00401 505 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 CDAN1Q8IWY9 1227 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 EHBP1Q8NDI1 1231 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 UNC13AQ9UPW8 1703 aa7.29□□□□□ -1.24
SRGAP1-207ENST00000631006 SNAPC4Q5SXM2 1469 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 ERICH4A6NGS2 130 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 NR1I2O75469 434 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 WDR44Q5JSH3 913 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 H0YIN7 160 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 BIN1O00499 593 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 SATB1Q01826 763 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC183Q5T5S1 534 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 BMP15O95972 392 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 KRT5P13647 590 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 ASIC1P78348 528 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 HACE1Q8IYU2 909 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 PPP1R9BQ96SB3 815 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 RTL9Q8NET4 1388 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 BAG6P46379 1132 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 CCDC65Q8IXS2 484 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 SMCR8Q8TEV9 937 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 FNBP1Q96RU3 617 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 AKR1B10O60218 316 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 HSF2BPO75031 334 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 STRN3Q13033 797 aa7.28□□□□□ -1.24
SRGAP1-207ENST00000631006 MCM9Q9NXL9 1143 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms