RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
SOX2-OT-249ENST00000628810 EXOC6Q8TAG9 804 aa12.32□□□□□ -0.44
SOX2-OT-249ENST00000628810 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 NPR1P16066 1061 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 LMBR1LQ6UX01 489 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 GREM2Q9H772 168 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 C1orf115Q9H7X2 142 aa12.31□□□□□ -0.44
SOX2-OT-249ENST00000628810 H0YIN7 160 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 KCNA3P22001 575 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 IRX6P78412 446 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 RPAP2Q8IXW5 612 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 MASTLQ96GX5 879 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-249ENST00000628810 NEFLP07196 543 aa12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 ITGA6P23229 1130 aa12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 CHRNA5P30532 468 aa12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 RPGRQ92834 1020 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-249ENST00000628810 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 A0A1B0GUL6 1792 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SPEF2Q9C093 1822 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SRGAP3O43295 1099 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SEC24BO95487 1268 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 DPEP1P16444 411 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 GRAPQ13588 217 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 PPP1R1BQ9UD71 204 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
SOX2-OT-249ENST00000628810 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 SYT17Q9BSW7 474 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 COPRSQ9NQ92 184 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 CACNA1SQ13698 1873 aa12.27□□□□□ -0.45
SOX2-OT-249ENST00000628810 TAF1P21675 1872 aa12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 HMMRO75330 724 aa12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 CELF1Q92879 486 aaKnown RBP12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
SOX2-OT-249ENST00000628810 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 BBOX1O75936 387 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 CIAO1O76071 339 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 RPS8P62241 208 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 HDAC1Q13547 482 aaPredicted RBP12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 PRPF40BQ6NWY9 871 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 TTLL6Q8N841 843 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 DUOX1Q9NRD9 1551 aa12.25□□□□□ -0.45
SOX2-OT-249ENST00000628810 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 C7orf43Q8WVR3 580 aa12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 ZNF622Q969S3 477 aaKnown RBP eCLIP12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
SOX2-OT-249ENST00000628810 EYA2O00167 538 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 SP8Q8IXZ3 490 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 ZNF594Q96JF6 807 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
SOX2-OT-249ENST00000628810 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 LDHAL6AQ6ZMR3 332 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 ARAP2Q8WZ64 1704 aa12.22□□□□□ -0.45
SOX2-OT-249ENST00000628810 MROH5Q6ZUA9 1318 aa12.21□□□□□ -0.45
SOX2-OT-249ENST00000628810 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms