RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 HTRA3P83110 453 aa20.17■□□□□ 0.82
CHRNA4-211ENST00000628606 MPHOSPH8Q99549 860 aa20.17■□□□□ 0.82
CHRNA4-211ENST00000628606 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
CHRNA4-211ENST00000628606 DUOX1Q9NRD9 1551 aa20.17■□□□□ 0.82
CHRNA4-211ENST00000628606 ECE2O60344 883 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 ALDH1L1O75891 902 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 ITGA6P23229 1130 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 ATP2B4P23634 1241 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 CASP7P55210 303 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 USP50Q70EL3 339 aaPredicted RBP20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 COL4A1P02462 1669 aa20.16■□□□□ 0.82
CHRNA4-211ENST00000628606 GMPSP49915 693 aaPredicted RBP20.15■□□□□ 0.82
CHRNA4-211ENST00000628606 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
CHRNA4-211ENST00000628606 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
CHRNA4-211ENST00000628606 DNAJC5GQ8N7S2 189 aa20.15■□□□□ 0.82
CHRNA4-211ENST00000628606 ADARB2Q9NS39 739 aaKnown RBP20.15■□□□□ 0.82
CHRNA4-211ENST00000628606 PTPRCP08575 1304 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 ANKRD18BA2A2Z9 1011 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 YDJCA8MPS7 323 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 GRM8O00222 908 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 CSF1RP07333 972 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 FAM161AQ3B820 660 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 CNTROBQ8N137 903 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 KLRG1Q96E93 195 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 GPR101Q96P66 508 aaPredicted RBP20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 MINPP1Q9UNW1 487 aa20.14■□□□□ 0.81
CHRNA4-211ENST00000628606 H7C1D1 291 aa20.13■□□□□ 0.81
CHRNA4-211ENST00000628606 IFIT5Q13325 482 aaKnown RBP20.13■□□□□ 0.81
CHRNA4-211ENST00000628606 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
CHRNA4-211ENST00000628606 MAP1SQ66K74 1059 aaPredicted RBP20.13■□□□□ 0.81
CHRNA4-211ENST00000628606 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
CHRNA4-211ENST00000628606 SPEF2Q9C093 1822 aa20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 PSMD14O00487 310 aa20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 CT47B1P0C2W7 299 aaPredicted RBP20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 CREBZFQ9NS37 354 aa20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 LTBP1Q14766 1721 aa20.12■□□□□ 0.81
CHRNA4-211ENST00000628606 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
CHRNA4-211ENST00000628606 MIER1Q8N108 512 aa20.11■□□□□ 0.81
CHRNA4-211ENST00000628606 SMC4Q9NTJ3 1288 aa20.11■□□□□ 0.81
CHRNA4-211ENST00000628606 PASKQ96RG2 1323 aa20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 ITGBL1O95965 494 aaPredicted RBP20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 CCT4P50991 539 aaKnown RBP20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 CCDC57Q2TAC2 916 aa20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 DPF2Q92785 391 aa20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
CHRNA4-211ENST00000628606 KCNJ4P48050 445 aa20.09■□□□□ 0.81
CHRNA4-211ENST00000628606 FOXO4P98177 505 aa20.09■□□□□ 0.81
CHRNA4-211ENST00000628606 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
CHRNA4-211ENST00000628606 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.81
CHRNA4-211ENST00000628606 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
CHRNA4-211ENST00000628606 PODNQ7Z5L7 613 aa20.08■□□□□ 0.81
CHRNA4-211ENST00000628606 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
CHRNA4-211ENST00000628606 KCNQ5Q9NR82 932 aa20.08■□□□□ 0.81
CHRNA4-211ENST00000628606 MED23Q9ULK4 1368 aa20.07■□□□□ 0.8
CHRNA4-211ENST00000628606 VIL1P09327 827 aaKnown RBP20.06■□□□□ 0.8
CHRNA4-211ENST00000628606 CHRNDQ07001 517 aa20.06■□□□□ 0.8
CHRNA4-211ENST00000628606 ZC3H15Q8WU90 426 aaKnown RBP20.06■□□□□ 0.8
CHRNA4-211ENST00000628606 ZNF804BA4D1E1 1349 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 USP17L3A6NCW0 530 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 USP17L4A6NCW7 530 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 LDHAL6AQ6ZMR3 332 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 USP17L1Q7RTZ2 530 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 CNNM1Q9NRU3 951 aa20.05■□□□□ 0.8
CHRNA4-211ENST00000628606 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
CHRNA4-211ENST00000628606 EPHA10Q5JZY3 1008 aa20.04■□□□□ 0.8
CHRNA4-211ENST00000628606 AGBL3Q8NEM8 1001 aa20.04■□□□□ 0.8
CHRNA4-211ENST00000628606 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
CHRNA4-211ENST00000628606 COA1Q9GZY4 146 aa20.04■□□□□ 0.8
CHRNA4-211ENST00000628606 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 RBM26Q5T8P6 1007 aaKnown RBP20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 RSBN1LQ6PCB5 846 aaPredicted RBP20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 JMYQ8N9B5 988 aa20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 TRPM4Q8TD43 1214 aa20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 FBXW7Q969H0 707 aa20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 MKRN1Q9UHC7 482 aaKnown RBP20.03■□□□□ 0.8
CHRNA4-211ENST00000628606 UTYO14607 1347 aa20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 SHTN1A0MZ66 631 aa20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 WTIPA6NIX2 430 aaPredicted RBP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 TBC1D10BQ4KMP7 808 aaPredicted RBP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 ZNF594Q96JF6 807 aaPredicted RBP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 ABT1Q9ULW3 272 aaKnown RBP20.02■□□□□ 0.8
CHRNA4-211ENST00000628606 PLIN1O60240 522 aa20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 TAF5LO75529 589 aa20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 HIRAP54198 1017 aaPredicted RBP20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 HELBQ8NG08 1087 aaPredicted RBP20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 PGAP2Q9UHJ9 254 aa20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
CHRNA4-211ENST00000628606 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms