RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 PI4KAP1Q8N8J0 262 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 TRPM4Q8TD43 1214 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 AIDAQ96BJ3 306 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 CACNA1FO60840 1977 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 ECE1P42892 770 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 MAP2K1Q02750 393 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 MYH3P11055 1940 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 ZNF609O15014 1411 aa16.01■□□□□ 0.15
SOX2-OT-247ENST00000628347 SCN9AQ15858 1988 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 SHTN1A0MZ66 631 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 CTSWP56202 376 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 JARID2Q92833 1246 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-247ENST00000628347 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-247ENST00000628347 MRS2Q9HD23 443 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 GGA1Q9UJY5 639 aa16■□□□□ 0.15
SOX2-OT-247ENST00000628347 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-247ENST00000628347 XDHP47989 1333 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 PSME4Q14997 1843 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 NEURL1BA8MQ27 555 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 ANP32CO43423 234 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 UFL1O94874 794 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 CELF2O95319 508 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 G2E3Q7L622 706 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 WDR63Q8IWG1 891 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 CDC5LQ99459 802 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
SOX2-OT-247ENST00000628347 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
SOX2-OT-247ENST00000628347 SAPCD2Q86UD0 394 aa15.98■□□□□ 0.15
SOX2-OT-247ENST00000628347 TTLL11Q8NHH1 800 aa15.98■□□□□ 0.15
SOX2-OT-247ENST00000628347 KCNQ5Q9NR82 932 aa15.98■□□□□ 0.15
SOX2-OT-247ENST00000628347 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 H7C1W4 665 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 ATP2B4P23634 1241 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 CYP4F22Q6NT55 531 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
SOX2-OT-247ENST00000628347 HSPA8P11142 646 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-247ENST00000628347 MAP2K2P36507 400 aa15.96■□□□□ 0.15
SOX2-OT-247ENST00000628347 FLIIQ13045 1269 aa15.96■□□□□ 0.15
SOX2-OT-247ENST00000628347 BSDC1Q9NW68 430 aaPredicted RBP15.96■□□□□ 0.15
SOX2-OT-247ENST00000628347 VAMP4O75379 141 aa15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 TBC1D10BQ4KMP7 808 aaPredicted RBP15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 PAXIP1Q6ZW49 1069 aaPredicted RBP15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 AGBL3Q8NEM8 1001 aa15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 GREM2Q9H772 168 aa15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
SOX2-OT-247ENST00000628347 G3V3G9 751 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 EGFRP00533 1210 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 LBX1P52954 281 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 CASP7P55210 303 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 GCKRQ14397 625 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 RSBN1LQ6PCB5 846 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 PODNQ7Z5L7 613 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 MED23Q9ULK4 1368 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 SPEF2Q9C093 1822 aa15.94■□□□□ 0.14
SOX2-OT-247ENST00000628347 KIF4BQ2VIQ3 1234 aa15.93■□□□□ 0.14
SOX2-OT-247ENST00000628347 UBE3BQ7Z3V4 1068 aa15.93■□□□□ 0.14
SOX2-OT-247ENST00000628347 LINS1Q8NG48 757 aa15.93■□□□□ 0.14
SOX2-OT-247ENST00000628347 GMLQ99445 158 aa15.93■□□□□ 0.14
SOX2-OT-247ENST00000628347 CSF1RP07333 972 aa15.92■□□□□ 0.14
SOX2-OT-247ENST00000628347 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
SOX2-OT-247ENST00000628347 KRT26Q7Z3Y9 468 aa15.92■□□□□ 0.14
SOX2-OT-247ENST00000628347 DCPSQ96C86 337 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-247ENST00000628347 ZNF408Q9H9D4 720 aa15.92■□□□□ 0.14
SOX2-OT-247ENST00000628347 USP17L3A6NCW0 530 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 USP17L4A6NCW7 530 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 AOC2O75106 756 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 CAPN15O75808 1086 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 IGHMBP2P38935 993 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 EXOSC9Q06265 439 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 USP17L1Q7RTZ2 530 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 LEMD3Q9Y2U8 911 aa15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
SOX2-OT-247ENST00000628347 CA12O43570 354 aa15.9■□□□□ 0.14
SOX2-OT-247ENST00000628347 ITGA6P23229 1130 aa15.9■□□□□ 0.14
SOX2-OT-247ENST00000628347 BRPF1P55201 1214 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms