RNA–Protein interactions for RNA: ENST00000628084.2

CDC16-211, Transcript of cell division cycle 16, humanhuman

TSL 5 BASIC

Gene CDC16, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-211ENST00000628084 ZPR1O75312 459 aa29.54■■■□□ 2.32
CDC16-211ENST00000628084 FRAT2O75474 233 aaPredicted RBP29.54■■■□□ 2.32
CDC16-211ENST00000628084 KCNJ4P48050 445 aa29.54■■■□□ 2.32
CDC16-211ENST00000628084 USPL1Q5W0Q7 1092 aa29.54■■■□□ 2.32
CDC16-211ENST00000628084 PDE8BO95263 885 aa29.54■■■□□ 2.32
CDC16-211ENST00000628084 MPHOSPH8Q99549 860 aa29.54■■■□□ 2.32
CDC16-211ENST00000628084 UPF3BQ9BZI7 483 aaKnown RBP29.54■■■□□ 2.32
CDC16-211ENST00000628084 MED23Q9ULK4 1368 aa29.53■■■□□ 2.32
CDC16-211ENST00000628084 BICDL1Q6ZP65 573 aa29.53■■■□□ 2.32
CDC16-211ENST00000628084 MAP4K1Q92918 833 aa29.53■■■□□ 2.32
CDC16-211ENST00000628084 MROH5Q6ZUA9 1318 aa29.53■■■□□ 2.32
CDC16-211ENST00000628084 TICAM2Q86XR7 235 aa29.52■■■□□ 2.32
CDC16-211ENST00000628084 VGLL2Q8N8G2 317 aa29.52■■■□□ 2.32
CDC16-211ENST00000628084 CIZ1Q9ULV3 898 aaPredicted RBP29.52■■■□□ 2.32
CDC16-211ENST00000628084 SCN7AQ01118 1682 aa29.52■■■□□ 2.32
CDC16-211ENST00000628084 PRPF40BQ6NWY9 871 aaKnown RBP29.52■■■□□ 2.32
CDC16-211ENST00000628084 RASEFQ8IZ41 740 aa29.52■■■□□ 2.32
CDC16-211ENST00000628084 LAMB2P55268 1798 aa29.51■■■□□ 2.32
CDC16-211ENST00000628084 FKBP4Q02790 459 aaKnown RBP eCLIP29.51■■■□□ 2.31
CDC16-211ENST00000628084 TBC1D9BQ66K14 1250 aa29.51■■■□□ 2.31
CDC16-211ENST00000628084 SEC31BQ9NQW1 1179 aa29.51■■■□□ 2.31
CDC16-211ENST00000628084 GTF2E1P29083 439 aaPredicted RBP29.51■■■□□ 2.31
CDC16-211ENST00000628084 NECTIN1Q15223 517 aa29.51■■■□□ 2.31
CDC16-211ENST00000628084 ZNF589Q86UQ0 364 aaPredicted RBP29.51■■■□□ 2.31
CDC16-211ENST00000628084 RBM8AQ9Y5S9 174 aaKnown RBP29.51■■■□□ 2.31
CDC16-211ENST00000628084 TAF1LQ8IZX4 1826 aa29.5■■■□□ 2.31
CDC16-211ENST00000628084 ZKSCAN1P17029 563 aaPredicted RBP29.5■■■□□ 2.31
CDC16-211ENST00000628084 ERFEQ4G0M1 354 aa29.5■■■□□ 2.31
CDC16-211ENST00000628084 FAM196AQ6ZSG2 479 aa29.5■■■□□ 2.31
CDC16-211ENST00000628084 BCL2L12Q9HB09 334 aa29.5■■■□□ 2.31
CDC16-211ENST00000628084 SRP68Q9UHB9 627 aaKnown RBP29.5■■■□□ 2.31
CDC16-211ENST00000628084 RTL9Q8NET4 1388 aa29.5■■■□□ 2.31
CDC16-211ENST00000628084 MCMDC2Q4G0Z9 681 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 KRT27Q7Z3Y8 459 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 EP400Q96L91 3159 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 SPEF2Q9C093 1822 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 IGHMBP2P38935 993 aaKnown RBP29.49■■■□□ 2.31
CDC16-211ENST00000628084 SETDB2Q96T68 719 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 LRP5O75197 1615 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 ABCC12Q96J65 1359 aa29.49■■■□□ 2.31
CDC16-211ENST00000628084 ARHGEF1Q92888 912 aaKnown RBP29.48■■■□□ 2.31
CDC16-211ENST00000628084 PUM3Q15397 648 aaKnown RBP29.48■■■□□ 2.31
CDC16-211ENST00000628084 NYXQ9GZU5 481 aa29.47■■■□□ 2.31
CDC16-211ENST00000628084 TAF5LO75529 589 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 CHGBP05060 677 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 RNF20Q5VTR2 975 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 HELBQ8NG08 1087 aaPredicted RBP29.46■■■□□ 2.31
CDC16-211ENST00000628084 KCNB2Q92953 911 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 C4BP0C0L5 1744 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 LRRFIP1Q32MZ4 808 aaKnown RBP29.46■■■□□ 2.31
CDC16-211ENST00000628084 CREB3L3Q68CJ9 461 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 LPIN2Q92539 896 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 TMX3Q96JJ7 454 aa29.46■■■□□ 2.31
CDC16-211ENST00000628084 RFC4P35249 363 aa29.45■■■□□ 2.31
CDC16-211ENST00000628084 TRAPPC3LQ5T215 181 aa29.45■■■□□ 2.31
CDC16-211ENST00000628084 AMIGO3Q86WK7 504 aa29.45■■■□□ 2.31
CDC16-211ENST00000628084 SEC62Q99442 399 aaKnown RBP29.45■■■□□ 2.31
CDC16-211ENST00000628084 PHF14O94880 888 aa29.44■■■□□ 2.3
CDC16-211ENST00000628084 CASTP20810 708 aaKnown RBP29.44■■■□□ 2.3
CDC16-211ENST00000628084 CDC5LQ99459 802 aaKnown RBP29.44■■■□□ 2.3
CDC16-211ENST00000628084 HELLSQ9NRZ9 838 aa29.44■■■□□ 2.3
CDC16-211ENST00000628084 SCARF1Q14162 830 aa29.44■■■□□ 2.3
CDC16-211ENST00000628084 LRRC4BQ9NT99 713 aa29.44■■■□□ 2.3
CDC16-211ENST00000628084 NOL8Q76FK4 1167 aaKnown RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 NBPF5PQ86XG9 351 aaPredicted RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 CWC22Q9HCG8 908 aaKnown RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 RNF113AO15541 343 aaKnown RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 CCDC129Q6ZRS4 1044 aa29.43■■■□□ 2.3
CDC16-211ENST00000628084 ZNF512BQ96KM6 892 aaPredicted RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 JAKMIP1Q96N16 626 aaKnown RBP29.43■■■□□ 2.3
CDC16-211ENST00000628084 BRWD3Q6RI45 1802 aa29.42■■■□□ 2.3
CDC16-211ENST00000628084 SLC27A2O14975 620 aa29.42■■■□□ 2.3
CDC16-211ENST00000628084 SSFA2P28290 1259 aa29.42■■■□□ 2.3
CDC16-211ENST00000628084 ZAP70P43403 619 aa29.42■■■□□ 2.3
CDC16-211ENST00000628084 SF3B3Q15393 1217 aaKnown RBP29.42■■■□□ 2.3
CDC16-211ENST00000628084 TM6SF1Q9BZW5 370 aa29.42■■■□□ 2.3
CDC16-211ENST00000628084 SLC5A1P13866 664 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 FGFR2P21802 821 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 ADCK5Q3MIX3 580 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 SLC10A5Q5PT55 438 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 TRIM37O94972 964 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 ZMYM1Q5SVZ6 1142 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 TPTE2Q6XPS3 522 aa29.41■■■□□ 2.3
CDC16-211ENST00000628084 MCAMP43121 646 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 CCDC102BQ68D86 513 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 HMG20BQ9P0W2 317 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 RAB3GAP1Q15042 981 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 PI16Q6UXB8 463 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 TTC14Q96N46 770 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 CYP46A1Q9Y6A2 500 aa29.4■■■□□ 2.3
CDC16-211ENST00000628084 ZFYP08048 801 aaPredicted RBP29.39■■■□□ 2.3
CDC16-211ENST00000628084 SLFNL1Q499Z3 407 aa29.39■■■□□ 2.3
CDC16-211ENST00000628084 ZNF772Q68DY9 489 aaPredicted RBP29.39■■■□□ 2.3
CDC16-211ENST00000628084 C3orf67Q6ZVT6 689 aa29.39■■■□□ 2.3
CDC16-211ENST00000628084 ANKRD18AQ8IVF6 992 aa29.39■■■□□ 2.3
CDC16-211ENST00000628084 ZSWIM6Q9HCJ5 1215 aa29.39■■■□□ 2.3
CDC16-211ENST00000628084 UQCRFS1P1P0C7P4 283 aa29.38■■■□□ 2.29
CDC16-211ENST00000628084 DEKP35659 375 aaKnown RBP29.38■■■□□ 2.29
CDC16-211ENST00000628084 SLC27A3Q5K4L6 730 aa29.38■■■□□ 2.29
CDC16-211ENST00000628084 ZGPATQ8N5A5 531 aaKnown RBP29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms