RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 C16orf71Q8IYS4 520 aaPredicted RBP14.65□□□□□ -0.06
SCN8A-209ENST00000627620 PAG1Q9NWQ8 432 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 LRSAM1Q6UWE0 723 aa14.65□□□□□ -0.06
SCN8A-209ENST00000627620 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 MRPS27Q92552 414 aaKnown RBP14.64□□□□□ -0.07
SCN8A-209ENST00000627620 SMARCC1Q92922 1105 aaPredicted RBP14.64□□□□□ -0.07
SCN8A-209ENST00000627620 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
SCN8A-209ENST00000627620 MPHOSPH6Q99547 160 aaKnown RBP14.64□□□□□ -0.07
SCN8A-209ENST00000627620 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
SCN8A-209ENST00000627620 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
SCN8A-209ENST00000627620 TRAF1Q13077 416 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 ANO6Q4KMQ2 910 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 PPP4R3BQ5MIZ7 849 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 HDAC9Q9UKV0 1011 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
SCN8A-209ENST00000627620 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCN8A-209ENST00000627620 MAGEB6P1A0A0J9YX57 407 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 DDB1Q16531 1140 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 TMEM87AQ8NBN3 555 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 NFATC2IPQ8NCF5 419 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 EHBP1Q8NDI1 1231 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 CTAGE1Q96RT6 745 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 CCDC172P0C7W6 258 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 NAPAP54920 295 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 SPAG5Q96R06 1193 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 ZSWIM4Q9H7M6 989 aa14.63□□□□□ -0.07
SCN8A-209ENST00000627620 HSP90AA4PQ58FG1 418 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
SCN8A-209ENST00000627620 SIRT1Q96EB6 747 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 IFI16Q16666 785 aaKnown RBP14.62□□□□□ -0.07
SCN8A-209ENST00000627620 CTR9Q6PD62 1173 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 TBC1D5Q92609 795 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
SCN8A-209ENST00000627620 MAATS1Q7Z4T9 603 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 OGFOD1Q8N543 542 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 RIMS2Q9UQ26 1411 aa14.62□□□□□ -0.07
SCN8A-209ENST00000627620 F13A1P00488 732 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 IL2RBP14784 551 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 SBNO2Q9Y2G9 1366 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 RNF113AO15541 343 aaKnown RBP14.61□□□□□ -0.07
SCN8A-209ENST00000627620 CWF19L2Q2TBE0 894 aaKnown RBP14.61□□□□□ -0.07
SCN8A-209ENST00000627620 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-209ENST00000627620 DACT1Q9NYF0 836 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 FLT4P35916 1363 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 NYXQ9GZU5 481 aa14.61□□□□□ -0.07
SCN8A-209ENST00000627620 DNM1Q05193 864 aaKnown RBP14.6□□□□□ -0.07
SCN8A-209ENST00000627620 ASIC1P78348 528 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 SPAG1Q07617 926 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 SMARCC2Q8TAQ2 1214 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
SCN8A-209ENST00000627620 STAMBPO95630 424 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 DRC1Q96MC2 740 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 FSD2A1L4K1 749 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 CCDC175P0C221 793 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 GNAT2P19087 354 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 USP37Q86T82 979 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 PRDM10Q9NQV6 1147 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 PSMA7O14818 248 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 KRT13P13646 458 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 ACTN2P35609 894 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 CYLC1P35663 651 aaPredicted RBP14.6□□□□□ -0.07
SCN8A-209ENST00000627620 CEP85Q6P2H3 762 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 MICALCLQ6ZW33 695 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 TSPYL6Q8N831 410 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 FAM200AQ8TCP9 573 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 C6orf50Q9HD87 102 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
SCN8A-209ENST00000627620 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
SCN8A-209ENST00000627620 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 HELBQ8NG08 1087 aaPredicted RBP14.59□□□□□ -0.07
SCN8A-209ENST00000627620 PLCH2O75038 1416 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 POLR3AO14802 1390 aaPredicted RBP14.59□□□□□ -0.07
SCN8A-209ENST00000627620 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 CALM1P0DP23 149 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 CALM2P0DP24 149 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 CALM3P0DP25 149 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 DHX58Q96C10 678 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 DUOX2Q9NRD8 1548 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 MIGA1Q8NAN2 632 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 COMMD10Q9Y6G5 202 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 CCDC171Q6TFL3 1326 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 VAMP4O75379 141 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 TFCP2Q12800 502 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 AOPEPQ8N6M6 819 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 C8orf37Q96NL8 207 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 FERMT1Q9BQL6 677 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 NUP160Q12769 1436 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 SPTLC2O15270 562 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms