RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ATP2B4P23634 1241 aa21.09■□□□□ 0.97
UBE3D-208ENST00000626828 CCDC57Q2TAC2 916 aa21.09■□□□□ 0.97
UBE3D-208ENST00000626828 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
UBE3D-208ENST00000626828 XDHP47989 1333 aa21.08■□□□□ 0.97
UBE3D-208ENST00000626828 ZNF541Q9H0D2 1346 aa21.08■□□□□ 0.97
UBE3D-208ENST00000626828 IQCA1LA6NCM1 817 aa21.08■□□□□ 0.97
UBE3D-208ENST00000626828 BCAR3O75815 825 aa21.08■□□□□ 0.97
UBE3D-208ENST00000626828 RBM46Q8TBY0 533 aaKnown RBP21.08■□□□□ 0.97
UBE3D-208ENST00000626828 SUCLG2Q96I99 432 aa21.08■□□□□ 0.97
UBE3D-208ENST00000626828 LRRC37AA6NMS7 1700 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 RIMBP2O15034 1052 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 KAZALD1Q96I82 304 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 ANKRD2Q9GZV1 360 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 HDAC5Q9UQL6 1122 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 GJA3Q9Y6H8 435 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 COL4A1P02462 1669 aa21.07■□□□□ 0.96
UBE3D-208ENST00000626828 UFL1O94874 794 aa21.06■□□□□ 0.96
UBE3D-208ENST00000626828 TNIP1Q15025 636 aa21.06■□□□□ 0.96
UBE3D-208ENST00000626828 FRAT1Q92837 279 aaPredicted RBP21.06■□□□□ 0.96
UBE3D-208ENST00000626828 WDR90Q96KV7 1748 aa21.06■□□□□ 0.96
UBE3D-208ENST00000626828 G3V3G9 751 aa21.05■□□□□ 0.96
UBE3D-208ENST00000626828 CXCL9Q07325 125 aa21.05■□□□□ 0.96
UBE3D-208ENST00000626828 TAF7LQ5H9L4 462 aa21.05■□□□□ 0.96
UBE3D-208ENST00000626828 DCAF8Q5TAQ9 597 aa21.05■□□□□ 0.96
UBE3D-208ENST00000626828 LEMD3Q9Y2U8 911 aa21.05■□□□□ 0.96
UBE3D-208ENST00000626828 INTS3Q68E01 1043 aaKnown RBP21.04■□□□□ 0.96
UBE3D-208ENST00000626828 CIAPIN1Q6FI81 312 aa21.04■□□□□ 0.96
UBE3D-208ENST00000626828 ATF7IPQ6VMQ6 1270 aa21.04■□□□□ 0.96
UBE3D-208ENST00000626828 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
UBE3D-208ENST00000626828 HACL1Q9UJ83 578 aa21.04■□□□□ 0.96
UBE3D-208ENST00000626828 COL4A5P29400 1685 aa21.04■□□□□ 0.96
UBE3D-208ENST00000626828 FSTL1Q12841 308 aa21.03■□□□□ 0.96
UBE3D-208ENST00000626828 RABL6Q3YEC7 729 aaPredicted RBP21.03■□□□□ 0.96
UBE3D-208ENST00000626828 ZKSCAN2Q63HK3 967 aa21.03■□□□□ 0.96
UBE3D-208ENST00000626828 LDHAL6AQ6ZMR3 332 aa21.03■□□□□ 0.96
UBE3D-208ENST00000626828 DOK7Q18PE1 504 aa21.02■□□□□ 0.96
UBE3D-208ENST00000626828 GPR101Q96P66 508 aaPredicted RBP21.02■□□□□ 0.96
UBE3D-208ENST00000626828 TAF1DQ9H5J8 278 aaPredicted RBP21.02■□□□□ 0.96
UBE3D-208ENST00000626828 DBNDD1Q9H9R9 158 aa21.02■□□□□ 0.96
UBE3D-208ENST00000626828 DUOX1Q9NRD9 1551 aa21.02■□□□□ 0.95
UBE3D-208ENST00000626828 SCN4AP35499 1836 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 YDJCA8MPS7 323 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 RAD17O75943 681 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 UBTFL1P0CB47 393 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-208ENST00000626828 TRIM27P14373 513 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-208ENST00000626828 CHRNDQ07001 517 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 ANKRD44Q8N8A2 993 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 SMC1BQ8NDV3 1235 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 ZNF594Q96JF6 807 aaPredicted RBP21.01■□□□□ 0.95
UBE3D-208ENST00000626828 CNNM1Q9NRU3 951 aa21.01■□□□□ 0.95
UBE3D-208ENST00000626828 ECE2O60344 883 aa21■□□□□ 0.95
UBE3D-208ENST00000626828 PNMA8AQ86V59 439 aaPredicted RBP21■□□□□ 0.95
UBE3D-208ENST00000626828 ZNF804BA4D1E1 1349 aa21■□□□□ 0.95
UBE3D-208ENST00000626828 LTBP1Q14766 1721 aa20.99■□□□□ 0.95
UBE3D-208ENST00000626828 WTIPA6NIX2 430 aaPredicted RBP20.99■□□□□ 0.95
UBE3D-208ENST00000626828 EPHX2P34913 555 aa20.99■□□□□ 0.95
UBE3D-208ENST00000626828 GNAI3P08754 354 aa20.98■□□□□ 0.95
UBE3D-208ENST00000626828 KCNJ4P48050 445 aa20.98■□□□□ 0.95
UBE3D-208ENST00000626828 PODNQ7Z5L7 613 aa20.98■□□□□ 0.95
UBE3D-208ENST00000626828 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
UBE3D-208ENST00000626828 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
UBE3D-208ENST00000626828 HSPA6P17066 643 aa20.97■□□□□ 0.95
UBE3D-208ENST00000626828 EPS15P42566 896 aa20.97■□□□□ 0.95
UBE3D-208ENST00000626828 SCNN1DP51172 638 aa20.97■□□□□ 0.95
UBE3D-208ENST00000626828 HELBQ8NG08 1087 aaPredicted RBP20.97■□□□□ 0.95
UBE3D-208ENST00000626828 PSMD14O00487 310 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 TAF5LO75529 589 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 GMPSP49915 693 aaPredicted RBP20.96■□□□□ 0.95
UBE3D-208ENST00000626828 CHADLQ6NUI6 762 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 DPF2Q92785 391 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 COA1Q9GZY4 146 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 KCNQ5Q9NR82 932 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 GPRC5DQ9NZD1 345 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 RIPOR2Q9Y4F9 1068 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 MED23Q9ULK4 1368 aa20.96■□□□□ 0.95
UBE3D-208ENST00000626828 PLIN1O60240 522 aa20.95■□□□□ 0.94
UBE3D-208ENST00000626828 VIL1P09327 827 aaKnown RBP20.95■□□□□ 0.94
UBE3D-208ENST00000626828 EAPPQ56P03 285 aaPredicted RBP20.95■□□□□ 0.94
UBE3D-208ENST00000626828 LDHDQ86WU2 507 aa20.95■□□□□ 0.94
UBE3D-208ENST00000626828 MEIS3Q99687 375 aa20.95■□□□□ 0.94
UBE3D-208ENST00000626828 PUS3Q9BZE2 481 aaKnown RBP20.95■□□□□ 0.94
UBE3D-208ENST00000626828 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
UBE3D-208ENST00000626828 CLEC11AQ9Y240 323 aa20.95■□□□□ 0.94
UBE3D-208ENST00000626828 RPS12P25398 132 aaKnown RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 C15orf52Q6ZUT6 534 aaKnown RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 USP50Q70EL3 339 aaPredicted RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 DZIP1LQ8IYY4 767 aaKnown RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 CNOT7Q9UIV1 285 aaKnown RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 LRRFIP2Q9Y608 721 aaKnown RBP20.94■□□□□ 0.94
UBE3D-208ENST00000626828 MROH5Q6ZUA9 1318 aa20.94■□□□□ 0.94
UBE3D-208ENST00000626828 H7C1D1 291 aa20.93■□□□□ 0.94
UBE3D-208ENST00000626828 TXNRD3Q86VQ6 643 aa20.93■□□□□ 0.94
UBE3D-208ENST00000626828 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
UBE3D-208ENST00000626828 TMEM57Q8N5G2 664 aa20.93■□□□□ 0.94
UBE3D-208ENST00000626828 ADARB2Q9NS39 739 aaKnown RBP20.93■□□□□ 0.94
UBE3D-208ENST00000626828 USP17L3A6NCW0 530 aa20.92■□□□□ 0.94
UBE3D-208ENST00000626828 USP17L4A6NCW7 530 aa20.92■□□□□ 0.94
UBE3D-208ENST00000626828 POTEIP0CG38 1075 aa20.92■□□□□ 0.94
UBE3D-208ENST00000626828 POTEJP0CG39 1038 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms