RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	TRIM35	Q9UPQ4	493 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	TRPM7	Q96QT4	1865 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	SH3TC1	Q8TE82	1336 aa		10.32	□□□□□ -0.76
TCF4-256	ENST00000626631	RAD17	O75943	681 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	CELF2	O95319	508 aa	Known RBP	10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	TNIP1	Q15025	636 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	KRT24	Q2M2I5	525 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	TMC4	Q7Z404	712 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	RASEF	Q8IZ41	740 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	NECTIN2	Q92692	538 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	CNOT7	Q9UIV1	285 aa	Known RBP	10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	ANKRD36C	Q5JPF3	1778 aa		10.31	□□□□□ -0.76
TCF4-256	ENST00000626631	LAMB2	P55268	1798 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	SHTN1	A0MZ66	631 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	RGS19	P49795	217 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	LMOD3	Q0VAK6	560 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	RALBP1	Q15311	655 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	CDC37L1	Q7L3B6	337 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	TRPM4	Q8TD43	1214 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	DPF2	Q92785	391 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	ISCA1	Q9BUE6	129 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	BEGAIN	Q9BUH8	593 aa		10.3	□□□□□ -0.76
TCF4-256	ENST00000626631	GRM1	Q13255	1194 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	TRIM28	Q13263	835 aa	Known RBP	10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	SF3B3	Q15393	1217 aa	Known RBP	10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	ANKRD13D	Q6ZTN6	518 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	PLBD2	Q8NHP8	589 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	BCL2L13	Q9BXK5	485 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	CHPF2	Q9P2E5	772 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	DUOX1	Q9NRD9	1551 aa		10.29	□□□□□ -0.76
TCF4-256	ENST00000626631	TAF1	P21675	1872 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631		H7C1D1	291 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	CA12	O43570	354 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	HOXB7	P09629	217 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	BRPF1	P55201	1214 aa	Predicted RBP	10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	WASHC4	Q2M389	1173 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	USP48	Q86UV5	1035 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	CELF1	Q92879	486 aa	Known RBP	10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	FAM89A	Q96GI7	184 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	KCNQ5	Q9NR82	932 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	POLL	Q9UGP5	575 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	TSKS	Q9UJT2	592 aa		10.28	□□□□□ -0.76
TCF4-256	ENST00000626631	PSMD14	O00487	310 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	EGFR	P00533	1210 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	GPSM2	P81274	684 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	NEUROD2	Q15784	382 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	DLK2	Q6UY11	383 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	MICALL2	Q8IY33	904 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	CCDC146	Q8IYE0	955 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	ZNF428	Q96B54	188 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	ZIC5	Q96T25	663 aa		10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	DBF4	Q9UBU7	674 aa	Predicted RBP	10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.27	□□□□□ -0.77
TCF4-256	ENST00000626631	ATP5J2-PTCD1	G3V325	749 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	FAM161A	Q3B820	660 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	HDGFL1	Q5TGJ6	251 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	SAMD7	Q7Z3H4	446 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	RUNDC1	Q96C34	613 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	CFAP44	Q96MT7	982 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	DBNDD1	Q9H9R9	158 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	HYPK	Q9NX55	129 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	LRRC37A	A6NMS7	1700 aa		10.26	□□□□□ -0.77
TCF4-256	ENST00000626631	COL4A1	P02462	1669 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	DDX60	Q8IY21	1712 aa	Known RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	CCDC85C	A6NKD9	419 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	FAM155A	B1AL88	458 aa	Predicted RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	C6orf229	H3BNL8	230 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	RIMBP2	O15034	1052 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	VIL1	P09327	827 aa	Known RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	ZNF853	P0CG23	659 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	PLCG2	P16885	1265 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	RPS12	P25398	132 aa	Known RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	HUNK	P57058	714 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	RPS8	P62241	208 aa	Known RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	NOG	Q13253	232 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	TBC1D16	Q8TBP0	767 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	MARVELD3	Q96A59	401 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	MCOLN1	Q9GZU1	580 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	ZNF408	Q9H9D4	720 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	PODXL2	Q9NZ53	605 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	ADAMTS8	Q9UP79	889 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	LAS1L	Q9Y4W2	734 aa	Known RBP	10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	RTL9	Q8NET4	1388 aa		10.25	□□□□□ -0.77
TCF4-256	ENST00000626631	IRS4	O14654	1257 aa	Predicted RBP	10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	SNPH	O15079	494 aa		10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	ECE2	O60344	883 aa		10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	DOK7	Q18PE1	504 aa		10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	DUSP27	Q5VZP5	1158 aa		10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	KRT26	Q7Z3Y9	468 aa		10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.24	□□□□□ -0.77
TCF4-256	ENST00000626631	POLR2A	P24928	1970 aa	Known RBP	10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	CASP8AP2	Q9UKL3	1982 aa		10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	MLLT1	Q03111	559 aa	Predicted RBP	10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	RTL5	Q5HYW3	569 aa	Predicted RBP	10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	RGMB	Q6NW40	437 aa		10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.23	□□□□□ -0.77

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