RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 MINPP1Q9UNW1 487 aa25.15■■□□□ 1.62
PNKP-219ENST00000626274 KIF3CO14782 793 aa25.14■■□□□ 1.62
PNKP-219ENST00000626274 WASHC4Q2M389 1173 aa25.14■■□□□ 1.62
PNKP-219ENST00000626274 RABL6Q3YEC7 729 aaPredicted RBP25.14■■□□□ 1.62
PNKP-219ENST00000626274 EYA3Q99504 573 aa25.14■■□□□ 1.62
PNKP-219ENST00000626274 BICC1Q9H694 974 aaKnown RBP25.14■■□□□ 1.62
PNKP-219ENST00000626274 RRAGCQ9HB90 399 aa25.14■■□□□ 1.62
PNKP-219ENST00000626274 GGA1Q9UJY5 639 aa25.14■■□□□ 1.62
PNKP-219ENST00000626274 WDR90Q96KV7 1748 aa25.14■■□□□ 1.61
PNKP-219ENST00000626274 ZNF541Q9H0D2 1346 aa25.13■■□□□ 1.61
PNKP-219ENST00000626274 DDNO94850 711 aaPredicted RBP25.13■■□□□ 1.61
PNKP-219ENST00000626274 UFL1O94874 794 aa25.13■■□□□ 1.61
PNKP-219ENST00000626274 UBTFL1P0CB47 393 aaPredicted RBP25.13■■□□□ 1.61
PNKP-219ENST00000626274 EIF6P56537 245 aaKnown RBP25.13■■□□□ 1.61
PNKP-219ENST00000626274 TNNQ9UQP3 1299 aa25.13■■□□□ 1.61
PNKP-219ENST00000626274 ATP2B4P23634 1241 aa25.12■■□□□ 1.61
PNKP-219ENST00000626274 TAF7LQ5H9L4 462 aa25.12■■□□□ 1.61
PNKP-219ENST00000626274 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
PNKP-219ENST00000626274 CLUAP1Q96AJ1 413 aa25.12■■□□□ 1.61
PNKP-219ENST00000626274 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
PNKP-219ENST00000626274 ANKRD2Q9GZV1 360 aa25.11■■□□□ 1.61
PNKP-219ENST00000626274 ZNRF3Q9ULT6 936 aa25.11■■□□□ 1.61
PNKP-219ENST00000626274 RIMBP2O15034 1052 aa25.1■■□□□ 1.61
PNKP-219ENST00000626274 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
PNKP-219ENST00000626274 ZC3H12CQ9C0D7 883 aaKnown RBP25.1■■□□□ 1.61
PNKP-219ENST00000626274 GPC2Q8N158 579 aa25.09■■□□□ 1.61
PNKP-219ENST00000626274 ZNF594Q96JF6 807 aaPredicted RBP25.09■■□□□ 1.61
PNKP-219ENST00000626274 GPR101Q96P66 508 aaPredicted RBP25.09■■□□□ 1.61
PNKP-219ENST00000626274 SCN4AP35499 1836 aa25.08■■□□□ 1.61
PNKP-219ENST00000626274 LDHAL6AQ6ZMR3 332 aa25.08■■□□□ 1.61
PNKP-219ENST00000626274 MEIS3Q99687 375 aa25.08■■□□□ 1.61
PNKP-219ENST00000626274 A0A1B0GUL6 1792 aa25.08■■□□□ 1.6
PNKP-219ENST00000626274 GNAI3P08754 354 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 CHRNDQ07001 517 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 FTSJ3Q8IY81 847 aaKnown RBP25.07■■□□□ 1.6
PNKP-219ENST00000626274 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
PNKP-219ENST00000626274 L3MBTL3Q96JM7 780 aaPredicted RBP25.07■■□□□ 1.6
PNKP-219ENST00000626274 CNNM1Q9NRU3 951 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 RCAN3Q9UKA8 241 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 LEMD3Q9Y2U8 911 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 GJA3Q9Y6H8 435 aa25.07■■□□□ 1.6
PNKP-219ENST00000626274 POTECB2RU33 542 aa25.06■■□□□ 1.6
PNKP-219ENST00000626274 DZIP1LQ8IYY4 767 aaKnown RBP25.06■■□□□ 1.6
PNKP-219ENST00000626274 TMEM57Q8N5G2 664 aa25.06■■□□□ 1.6
PNKP-219ENST00000626274 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
PNKP-219ENST00000626274 CXCL9Q07325 125 aa25.05■■□□□ 1.6
PNKP-219ENST00000626274 DBNDD1Q9H9R9 158 aa25.05■■□□□ 1.6
PNKP-219ENST00000626274 IQCA1LA6NCM1 817 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 G3V3G9 751 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 TOMM70O94826 608 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 DOK7Q18PE1 504 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 DCAF8Q5TAQ9 597 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 LRRFIP2Q9Y608 721 aaKnown RBP25.04■■□□□ 1.6
PNKP-219ENST00000626274 ZNF804BA4D1E1 1349 aa25.04■■□□□ 1.6
PNKP-219ENST00000626274 WTIPA6NIX2 430 aaPredicted RBP25.03■■□□□ 1.6
PNKP-219ENST00000626274 YDJCA8MPS7 323 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 ECE2O60344 883 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 C1QTNF8P60827 252 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 TNIP1Q15025 636 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 CIAPIN1Q6FI81 312 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 MED23Q9ULK4 1368 aa25.03■■□□□ 1.6
PNKP-219ENST00000626274 KCNJ4P48050 445 aa25.02■■□□□ 1.6
PNKP-219ENST00000626274 HELBQ8NG08 1087 aaPredicted RBP25.02■■□□□ 1.6
PNKP-219ENST00000626274 RAD17O75943 681 aa25.01■■□□□ 1.59
PNKP-219ENST00000626274 RLBP1P12271 317 aa25.01■■□□□ 1.59
PNKP-219ENST00000626274 PUS3Q9BZE2 481 aaKnown RBP25.01■■□□□ 1.59
PNKP-219ENST00000626274 SCN9AQ15858 1988 aa25.01■■□□□ 1.59
PNKP-219ENST00000626274 TAF5LO75529 589 aa25■■□□□ 1.59
PNKP-219ENST00000626274 MS4A1P11836 297 aa25■■□□□ 1.59
PNKP-219ENST00000626274 RBM46Q8TBY0 533 aaKnown RBP25■■□□□ 1.59
PNKP-219ENST00000626274 HACL1Q9UJ83 578 aa25■■□□□ 1.59
PNKP-219ENST00000626274 RIPOR2Q9Y4F9 1068 aa25■■□□□ 1.59
PNKP-219ENST00000626274 PLIN1O60240 522 aa24.99■■□□□ 1.59
PNKP-219ENST00000626274 RFX5P48382 616 aaPredicted RBP24.99■■□□□ 1.59
PNKP-219ENST00000626274 ITPRIPQ8IWB1 547 aa24.99■■□□□ 1.59
PNKP-219ENST00000626274 KLHDC4Q8TBB5 520 aa24.99■■□□□ 1.59
PNKP-219ENST00000626274 PSME4Q14997 1843 aa24.98■■□□□ 1.59
PNKP-219ENST00000626274 MROH5Q6ZUA9 1318 aa24.98■■□□□ 1.59
PNKP-219ENST00000626274 GNAI2P04899 355 aa24.98■■□□□ 1.59
PNKP-219ENST00000626274 LMOD1P29536 600 aaPredicted RBP24.98■■□□□ 1.59
PNKP-219ENST00000626274 TAF1DQ9H5J8 278 aaPredicted RBP24.98■■□□□ 1.59
PNKP-219ENST00000626274 SCNN1DP51172 638 aa24.97■■□□□ 1.59
PNKP-219ENST00000626274 LRRC24Q50LG9 513 aa24.97■■□□□ 1.59
PNKP-219ENST00000626274 PODNQ7Z5L7 613 aa24.97■■□□□ 1.59
PNKP-219ENST00000626274 TXNRD3Q86VQ6 643 aa24.97■■□□□ 1.59
PNKP-219ENST00000626274 SNAP23O00161 211 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 PSMD14O00487 310 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 EPHX2P34913 555 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 PTPN12Q05209 780 aaKnown RBP24.96■■□□□ 1.59
PNKP-219ENST00000626274 C15orf52Q6ZUT6 534 aaKnown RBP24.96■■□□□ 1.59
PNKP-219ENST00000626274 PANK1Q8TE04 598 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 COA1Q9GZY4 146 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 KCNQ5Q9NR82 932 aa24.96■■□□□ 1.59
PNKP-219ENST00000626274 EYA2O00167 538 aa24.95■■□□□ 1.58
PNKP-219ENST00000626274 KLRK1P26718 216 aa24.95■■□□□ 1.58
PNKP-219ENST00000626274 GMPSP49915 693 aaPredicted RBP24.95■■□□□ 1.58
PNKP-219ENST00000626274 MTX1Q13505 466 aa24.95■■□□□ 1.58
PNKP-219ENST00000626274 GPRC5DQ9NZD1 345 aa24.95■■□□□ 1.58
PNKP-219ENST00000626274 ZBTB7BO15156 539 aaPredicted RBP24.94■■□□□ 1.58
PNKP-219ENST00000626274 UBE4AQ14139 1066 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms