RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 TIGD1Q96MW7 591 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 MFRPQ9BY79 579 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 UPF3BQ9BZI7 483 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 TNS3Q68CZ2 1445 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 CEMIPQ8WUJ3 1361 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 USP42Q9H9J4 1324 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 NUTM2FA1L443 756 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 FAM83GA6ND36 823 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 TULP2O00295 520 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 FIBPO43427 364 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 GIGYF1O75420 1035 aaPredicted RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 GJB2P29033 226 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 DHX8Q14562 1220 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 KRT24Q2M2I5 525 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 CEP135Q66GS9 1140 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 NYAP1Q6ZVC0 841 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 RUFY3Q7L099 469 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 SPC24Q8NBT2 197 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 SSH3Q8TE77 659 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 KIF1BPQ96EK5 621 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 MRFAP1L1Q96HT8 127 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 DNAJC2Q99543 621 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 SCAND2PQ9GZW5 306 aaPredicted RBP4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 CBX8Q9HC52 389 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 BABAM1Q9NWV8 329 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 HYPKQ9NX55 129 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 AXIN2Q9Y2T1 843 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 ANKRD36CQ5JPF3 1778 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 PSDA5PKW4 1024 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 APBB1O00213 710 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 ATP8B1O43520 1251 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 GTPBP6O43824 516 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 PDCP20941 246 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 DNM1Q05193 864 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 BMS1Q14692 1282 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TPD52L1Q16890 204 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TTC6Q86TZ1 520 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 CNTROBQ8N137 903 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 IPO4Q8TEX9 1081 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 RUFY2Q8WXA3 655 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 EYA1Q99502 592 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 CLSTN2Q9H4D0 955 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 EXOC6BQ9Y2D4 811 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 NRAPQ86VF7 1730 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 COL14A1Q05707 1796 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 CICQ96RK0 1608 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TTC41PQ6P2S7 1318 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 NPHP3Q7Z494 1330 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TJP1Q07157 1748 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 CTAGE5O15320 804 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 SLU7O95391 586 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 KCNJ6P48051 423 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 PDE4CQ08493 712 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 DCTN1Q14203 1278 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 FOXD4L6Q3SYB3 417 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 FOXD4L3Q6VB84 417 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 NOL8Q76FK4 1167 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 UNC5CLQ8IV45 518 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 LRRC8AQ8IWT6 810 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 KCNH5Q8NCM2 988 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 PI4K2BQ8TCG2 481 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 CACTINQ8WUQ7 758 aaKnown RBP4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 IP6K1Q92551 441 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TRIM5Q9C035 493 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TNMDQ9H2S6 317 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 TMEM94Q12767 1356 aa4.92□□□□□ -1.62
PTP4A1-205ENST00000626021 AHDC1Q5TGY3 1603 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 PNMA6EA0A0J9YXQ4 647 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 ZBTB7CA1YPR0 619 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 AMPHP49418 695 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 PTPN14Q15678 1187 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 KMT5BQ4FZB7 885 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 ANO6Q4KMQ2 910 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 HSP90AB4PQ58FF6 505 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 G2E3Q7L622 706 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 DRC7Q8IY82 874 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 C16orf45Q96MC5 204 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 IL25Q9H293 177 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 PDRG1Q9NUG6 133 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CLIP2Q9UDT6 1046 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CYP46A1Q9Y6A2 500 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CPDO75976 1380 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 COL16A1Q07092 1604 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 LRP6O75581 1613 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 PPP1R37O75864 691 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 H2AFXP16104 143 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 LIG1P18858 919 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CYP2C19P33261 490 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 KCNJ4P48050 445 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 LRMPQ12912 555 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 IQCB1Q15051 598 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 NECTIN1Q15223 517 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 ANKRD1Q15327 319 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 MTHFSDQ2M296 383 aaKnown RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CCDC30Q5VVM6 783 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 LARP1BQ659C4 914 aaKnown RBP4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 LUZP1Q86V48 1076 aa4.91□□□□□ -1.62
PTP4A1-205ENST00000626021 CCDC83Q8IWF9 413 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms