RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
VPS8-227ENST00000625842 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 CEBPZQ03701 1054 aaKnown RBP12.72□□□□□ -0.37
VPS8-227ENST00000625842 FMNL3Q8IVF7 1028 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 BABAM1Q9NWV8 329 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.372e-8■■■□□ 18.4
VPS8-227ENST00000625842 CCDC192P0DO97 292 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 IDEP14735 1019 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
VPS8-227ENST00000625842 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
VPS8-227ENST00000625842 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 IQCA1LA6NCM1 817 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
VPS8-227ENST00000625842 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
VPS8-227ENST00000625842 CNGA1P29973 690 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 CCDC40Q4G0X9 1142 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 IL16Q14005 1332 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 ATP2B4P23634 1241 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 MCM5P33992 734 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 CERKQ8TCT0 537 aa12.71□□□□□ -0.37
VPS8-227ENST00000625842 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.38
VPS8-227ENST00000625842 PDE8AO60658 829 aa12.71□□□□□ -0.38
VPS8-227ENST00000625842 TCERG1LQ5VWI1 586 aa12.71□□□□□ -0.38
VPS8-227ENST00000625842 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.38
VPS8-227ENST00000625842 NEO1Q92859 1461 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 GRM8O00222 908 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 HS2ST1Q7LGA3 356 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 NAPAP54920 295 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 TAOK3Q9H2K8 898 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 TNMDQ9H2S6 317 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 MAP4K4O95819 1239 aaPredicted RBP12.7□□□□□ -0.38
VPS8-227ENST00000625842 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
VPS8-227ENST00000625842 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 PALM3A6NDB9 673 aaPredicted RBP12.7□□□□□ -0.38
VPS8-227ENST00000625842 FAM47CQ5HY64 1035 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 TRMT1LQ7Z2T5 733 aaKnown RBP12.7□□□□□ -0.38
VPS8-227ENST00000625842 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 SREK1Q8WXA9 508 aaKnown RBP12.7□□□□□ -0.38
VPS8-227ENST00000625842 NACA2Q9H009 215 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
VPS8-227ENST00000625842 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 RAB3GAP1Q15042 981 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 FAM193BQ96PV7 902 aaPredicted RBP12.69□□□□□ -0.38
VPS8-227ENST00000625842 FIBPO43427 364 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
VPS8-227ENST00000625842 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 PPP2R3CQ969Q6 453 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 IREB2P48200 963 aaKnown RBP12.69□□□□□ -0.38
VPS8-227ENST00000625842 ODR4Q5SWX8 454 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
VPS8-227ENST00000625842 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS8-227ENST00000625842 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 TEKT1Q969V4 418 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 AP5M1Q9H0R1 490 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
VPS8-227ENST00000625842 THRAP3Q9Y2W1 955 aaKnown RBP12.69□□□□□ -0.38
VPS8-227ENST00000625842 SMTNP53814 917 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
VPS8-227ENST00000625842 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
VPS8-227ENST00000625842 VIMP08670 466 aaKnown RBP12.68□□□□□ -0.38
VPS8-227ENST00000625842 FERP16591 822 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 SLC39A6Q13433 755 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 GOLGA6L7A0A1B0GV03 622 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 KIAA1328Q86T90 577 aa12.68□□□□□ -0.38
VPS8-227ENST00000625842 GABPB2Q8TAK5 448 aaPredicted RBP12.68□□□□□ -0.38
VPS8-227ENST00000625842 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
VPS8-227ENST00000625842 USP8P40818 1118 aa12.67□□□□□ -0.38
VPS8-227ENST00000625842 LMAN1P49257 510 aa12.67□□□□□ -0.38
VPS8-227ENST00000625842 PRKG1Q13976 671 aa12.67□□□□□ -0.38
VPS8-227ENST00000625842 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
VPS8-227ENST00000625842 KRT79Q5XKE5 535 aa12.67□□□□□ -0.38
VPS8-227ENST00000625842 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
VPS8-227ENST00000625842 IFI16Q16666 785 aaKnown RBP12.67□□□□□ -0.38
VPS8-227ENST00000625842 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
VPS8-227ENST00000625842 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
VPS8-227ENST00000625842 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
VPS8-227ENST00000625842 TRIM37O94972 964 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 KIF4BQ2VIQ3 1234 aa12.66□□□□□ -0.38
VPS8-227ENST00000625842 NPATQ14207 1427 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms