RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 KIAA1211Q6ZU35 1233 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 ZDHHC9Q9Y397 364 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 RFX7Q2KHR2 1363 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 SCN7AQ01118 1682 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 RAD50Q92878 1312 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 GOLGA6L22H0YM25 854 aa24.22■■□□□ 1.47
UBAP1-204ENST00000625521 HCLS1P14317 486 aaPredicted RBP24.22■■□□□ 1.47
UBAP1-204ENST00000625521 ZNF772Q68DY9 489 aaPredicted RBP24.21■■□□□ 1.47
UBAP1-204ENST00000625521 CNNM1Q9NRU3 951 aa24.21■■□□□ 1.47
UBAP1-204ENST00000625521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.2■■□□□ 1.47
UBAP1-204ENST00000625521 TMX3Q96JJ7 454 aa24.2■■□□□ 1.47
UBAP1-204ENST00000625521 LSG1Q9H089 658 aaKnown RBP24.2■■□□□ 1.47
UBAP1-204ENST00000625521 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
UBAP1-204ENST00000625521 RTL9Q8NET4 1388 aa24.2■■□□□ 1.46
UBAP1-204ENST00000625521 KLHL40Q2TBA0 621 aa24.2■■□□□ 1.46
UBAP1-204ENST00000625521 CCDC152Q4G0S7 254 aa24.2■■□□□ 1.46
UBAP1-204ENST00000625521 METTL24Q5JXM2 366 aa24.2■■□□□ 1.46
UBAP1-204ENST00000625521 TICAM2Q86XR7 235 aa24.19■■□□□ 1.46
UBAP1-204ENST00000625521 LRP5O75197 1615 aa24.19■■□□□ 1.46
UBAP1-204ENST00000625521 ZPR1O75312 459 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 HSPA4P34932 840 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 DNAJC2Q99543 621 aaKnown RBP24.18■■□□□ 1.46
UBAP1-204ENST00000625521 BCL2L12Q9HB09 334 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 SNRKQ9NRH2 765 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 MCM2P49736 904 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 CCDC158Q5M9N0 1113 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 USPL1Q5W0Q7 1092 aa24.18■■□□□ 1.46
UBAP1-204ENST00000625521 LAMB2P55268 1798 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 NMIQ13287 307 aaPredicted RBP24.17■■□□□ 1.46
UBAP1-204ENST00000625521 CUL4AQ13619 759 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 MCTP1Q6DN14 999 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 LMBRD1Q9NUN5 540 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 C4BP0C0L5 1744 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 RBM6P78332 1123 aaKnown RBP24.17■■□□□ 1.46
UBAP1-204ENST00000625521 XAGE2Q96GT9 111 aa24.17■■□□□ 1.46
UBAP1-204ENST00000625521 TAF1LQ8IZX4 1826 aa24.16■■□□□ 1.46
UBAP1-204ENST00000625521 DDX60Q8IY21 1712 aaKnown RBP24.16■■□□□ 1.46
UBAP1-204ENST00000625521 MROH5Q6ZUA9 1318 aa24.16■■□□□ 1.46
UBAP1-204ENST00000625521 ATP2B3Q16720 1220 aa24.16■■□□□ 1.46
UBAP1-204ENST00000625521 GORABQ5T7V8 394 aa24.16■■□□□ 1.46
UBAP1-204ENST00000625521 VGLL2Q8N8G2 317 aa24.16■■□□□ 1.46
UBAP1-204ENST00000625521 EDC3Q96F86 508 aaKnown RBP24.16■■□□□ 1.46
UBAP1-204ENST00000625521 ABCC12Q96J65 1359 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 IFIT1P09914 478 aaKnown RBP24.15■■□□□ 1.46
UBAP1-204ENST00000625521 TBC1D9BQ66K14 1250 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 FAM227BQ96M60 508 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 NYXQ9GZU5 481 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 RRAGDQ9NQL2 400 aaPredicted RBP24.15■■□□□ 1.46
UBAP1-204ENST00000625521 DDX49Q9Y6V7 483 aaKnown RBP24.15■■□□□ 1.46
UBAP1-204ENST00000625521 PDE8BO95263 885 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 KBTBD3Q8NAB2 608 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 ARHGEF1Q92888 912 aaKnown RBP24.15■■□□□ 1.46
UBAP1-204ENST00000625521 PAG1Q9NWQ8 432 aa24.15■■□□□ 1.46
UBAP1-204ENST00000625521 SLC27A3Q5K4L6 730 aa24.14■■□□□ 1.45
UBAP1-204ENST00000625521 TTC39AQ5SRH9 613 aa24.14■■□□□ 1.45
UBAP1-204ENST00000625521 SMIM5Q71RC9 77 aa24.14■■□□□ 1.45
UBAP1-204ENST00000625521 SETDB2Q96T68 719 aa24.14■■□□□ 1.45
UBAP1-204ENST00000625521 SRP68Q9UHB9 627 aaKnown RBP24.14■■□□□ 1.45
UBAP1-204ENST00000625521 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 MPHOSPH8Q99549 860 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 LRRC4BQ9NT99 713 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 A0A0D9SFI3 127 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 ERFEQ4G0M1 354 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 BICDL1Q6ZP65 573 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 NDUFB9Q9Y6M9 179 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 CCDC171Q6TFL3 1326 aa24.13■■□□□ 1.45
UBAP1-204ENST00000625521 ADRA2BP18089 450 aa24.12■■□□□ 1.45
UBAP1-204ENST00000625521 ADORA1P30542 326 aa24.12■■□□□ 1.45
UBAP1-204ENST00000625521 SLC10A5Q5PT55 438 aa24.12■■□□□ 1.45
UBAP1-204ENST00000625521 DDX46Q7L014 1031 aaKnown RBP24.12■■□□□ 1.45
UBAP1-204ENST00000625521 BRWD3Q6RI45 1802 aa24.12■■□□□ 1.45
UBAP1-204ENST00000625521 MED23Q9ULK4 1368 aa24.12■■□□□ 1.45
UBAP1-204ENST00000625521 GOLIM4O00461 696 aa24.11■■□□□ 1.45
UBAP1-204ENST00000625521 HMGB2P26583 209 aaKnown RBP24.11■■□□□ 1.45
UBAP1-204ENST00000625521 RFC4P35249 363 aa24.11■■□□□ 1.45
UBAP1-204ENST00000625521 IGHMBP2P38935 993 aaKnown RBP24.11■■□□□ 1.45
UBAP1-204ENST00000625521 SEC31BQ9NQW1 1179 aa24.11■■□□□ 1.45
UBAP1-204ENST00000625521 SPEF2Q9C093 1822 aa24.11■■□□□ 1.45
UBAP1-204ENST00000625521 GTF2E1P29083 439 aaPredicted RBP24.11■■□□□ 1.45
UBAP1-204ENST00000625521 SF3B3Q15393 1217 aaKnown RBP24.11■■□□□ 1.45
UBAP1-204ENST00000625521 AMIGO3Q86WK7 504 aa24.11■■□□□ 1.45
UBAP1-204ENST00000625521 TRIM37O94972 964 aa24.1■■□□□ 1.45
UBAP1-204ENST00000625521 PUM3Q15397 648 aaKnown RBP24.1■■□□□ 1.45
UBAP1-204ENST00000625521 INTS4Q96HW7 963 aaKnown RBP24.1■■□□□ 1.45
UBAP1-204ENST00000625521 CDC5LQ99459 802 aaKnown RBP24.1■■□□□ 1.45
UBAP1-204ENST00000625521 UPF3BQ9BZI7 483 aaKnown RBP24.1■■□□□ 1.45
UBAP1-204ENST00000625521 PTH1RQ03431 593 aa24.1■■□□□ 1.45
UBAP1-204ENST00000625521 ZNF512BQ96KM6 892 aaPredicted RBP24.1■■□□□ 1.45
UBAP1-204ENST00000625521 LPIN2Q92539 896 aa24.09■■□□□ 1.45
UBAP1-204ENST00000625521 MAP4K1Q92918 833 aa24.09■■□□□ 1.45
UBAP1-204ENST00000625521 COL24A1Q17RW2 1714 aa24.09■■□□□ 1.45
UBAP1-204ENST00000625521 NBPF5PQ86XG9 351 aaPredicted RBP24.08■■□□□ 1.45
UBAP1-204ENST00000625521 CHAMP1Q96JM3 812 aa24.08■■□□□ 1.45
UBAP1-204ENST00000625521 SNX14Q9Y5W7 946 aa24.08■■□□□ 1.45
UBAP1-204ENST00000625521 PHF14O94880 888 aa24.08■■□□□ 1.44
UBAP1-204ENST00000625521 BRD1O95696 1058 aa24.08■■□□□ 1.44
UBAP1-204ENST00000625521 FGFR2P21802 821 aa24.08■■□□□ 1.44
UBAP1-204ENST00000625521 TPTE2Q6XPS3 522 aa24.08■■□□□ 1.44
UBAP1-204ENST00000625521 LRRFIP1Q32MZ4 808 aaKnown RBP24.07■■□□□ 1.44
UBAP1-204ENST00000625521 KCNB2Q92953 911 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms