RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 SASH1O94885 1247 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 HCLS1P14317 486 aaPredicted RBP21.15■□□□□ 0.98
PCF11-207ENST00000624931 UTP14AQ9BVJ6 771 aaKnown RBP21.15■□□□□ 0.98
PCF11-207ENST00000624931 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 ZDHHC9Q9Y397 364 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 AOX1Q06278 1338 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
PCF11-207ENST00000624931 COL24A1Q17RW2 1714 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 ZPR1O75312 459 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 G3BP1Q13283 466 aaKnown RBP eCLIP21.15■□□□□ 0.98
PCF11-207ENST00000624931 PARP10Q53GL7 1025 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 HSP90AB4PQ58FF6 505 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 GPT2Q8TD30 523 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 COPRSQ9NQ92 184 aa21.15■□□□□ 0.98
PCF11-207ENST00000624931 LAMB2P55268 1798 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 TUBGCP6Q96RT7 1819 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 BRD1O95696 1058 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 ZNF827Q17R98 1081 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 CLEC4GQ6UXB4 293 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
PCF11-207ENST00000624931 TMX3Q96JJ7 454 aa21.14■□□□□ 0.97
PCF11-207ENST00000624931 PLSCR1O15162 318 aa21.13■□□□□ 0.97
PCF11-207ENST00000624931 CTSWP56202 376 aa21.13■□□□□ 0.97
PCF11-207ENST00000624931 ESYT1Q9BSJ8 1104 aa21.13■□□□□ 0.97
PCF11-207ENST00000624931 ZKSCAN5Q9Y2L8 839 aa21.13■□□□□ 0.97
PCF11-207ENST00000624931 SH3TC1Q8TE82 1336 aa21.13■□□□□ 0.97
PCF11-207ENST00000624931 RFC4P35249 363 aa21.12■□□□□ 0.97
PCF11-207ENST00000624931 NEK4P51957 841 aa21.12■□□□□ 0.97
PCF11-207ENST00000624931 CSF1RP07333 972 aa21.12■□□□□ 0.97
PCF11-207ENST00000624931 GREM2Q9H772 168 aa21.12■□□□□ 0.97
PCF11-207ENST00000624931 STAP2Q9UGK3 403 aa21.12■□□□□ 0.97
PCF11-207ENST00000624931 MX1P20591 662 aa21.11■□□□□ 0.97
PCF11-207ENST00000624931 PKP1Q13835 747 aa21.11■□□□□ 0.97
PCF11-207ENST00000624931 MTERF4Q7Z6M4 381 aaKnown RBP21.11■□□□□ 0.97
PCF11-207ENST00000624931 CASZ1Q86V15 1759 aa21.11■□□□□ 0.97
PCF11-207ENST00000624931 ERC1Q8IUD2 1116 aa21.11■□□□□ 0.97
PCF11-207ENST00000624931 TTLL11Q8NHH1 800 aa21.11■□□□□ 0.97
PCF11-207ENST00000624931 RGPD3A6NKT7 1758 aaPredicted RBP21.1■□□□□ 0.97
PCF11-207ENST00000624931 RGPD4Q7Z3J3 1758 aa21.1■□□□□ 0.97
PCF11-207ENST00000624931 ABCC12Q96J65 1359 aa21.1■□□□□ 0.97
PCF11-207ENST00000624931 PDE8AO60658 829 aa21.1■□□□□ 0.97
PCF11-207ENST00000624931 ERFEQ4G0M1 354 aa21.1■□□□□ 0.97
PCF11-207ENST00000624931 PUS3Q9BZE2 481 aaKnown RBP21.1■□□□□ 0.97
PCF11-207ENST00000624931 AK9Q5TCS8 1911 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 TFCP2Q12800 502 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 LRRC24Q50LG9 513 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 UVSSAQ2YD98 709 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 ATG9AQ7Z3C6 839 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 AACSQ86V21 672 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 CCDC24Q8N4L8 307 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 FAM184AQ8NB25 1140 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 TLR7Q9NYK1 1049 aaKnown RBP21.09■□□□□ 0.97
PCF11-207ENST00000624931 TMEM63CQ9P1W3 806 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 COL4A1P02462 1669 aa21.09■□□□□ 0.97
PCF11-207ENST00000624931 ADRA2BP18089 450 aa21.08■□□□□ 0.97
PCF11-207ENST00000624931 CCDC57Q2TAC2 916 aa21.08■□□□□ 0.97
PCF11-207ENST00000624931 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
PCF11-207ENST00000624931 RGL2O15211 777 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 LETM1O95202 739 aaPredicted RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 ITGA6P23229 1130 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 AKT1S1Q96B36 256 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 EAF2Q96CJ1 260 aaPredicted RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 CCDC8Q9H0W5 538 aaPredicted RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 TSPY26PQ9H489 355 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 WDR33Q9C0J8 1336 aaKnown RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 CHMLP26374 656 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 EN1Q05925 392 aaPredicted RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 EZH2Q15910 746 aaKnown RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 CLASRPQ8N2M8 674 aaKnown RBP21.07■□□□□ 0.96
PCF11-207ENST00000624931 SETDB2Q96T68 719 aa21.07■□□□□ 0.96
PCF11-207ENST00000624931 SPEF2Q9C093 1822 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 EYA2O00167 538 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 GYS1P13807 737 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 NFIXQ14938 502 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 TFCP2L1Q9NZI6 479 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 LRP5O75197 1615 aa21.06■□□□□ 0.96
PCF11-207ENST00000624931 SYCE3A1L190 88 aa21.05■□□□□ 0.96
PCF11-207ENST00000624931 TAF7LQ5H9L4 462 aa21.05■□□□□ 0.96
PCF11-207ENST00000624931 RBM27Q9P2N5 1060 aaKnown RBP21.05■□□□□ 0.96
PCF11-207ENST00000624931 TNRC6CQ9HCJ0 1690 aaKnown RBP21.05■□□□□ 0.96
PCF11-207ENST00000624931 RIC1Q4ADV7 1423 aa21.04■□□□□ 0.96
PCF11-207ENST00000624931 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
PCF11-207ENST00000624931 SEC31BQ9NQW1 1179 aa21.04■□□□□ 0.96
PCF11-207ENST00000624931 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
PCF11-207ENST00000624931 IFIT2P09913 472 aaKnown RBP21.04■□□□□ 0.96
PCF11-207ENST00000624931 PI4K2BQ8TCG2 481 aa21.04■□□□□ 0.96
PCF11-207ENST00000624931 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.04■□□□□ 0.96
PCF11-207ENST00000624931 DYNC1I1O14576 645 aa21.03■□□□□ 0.96
PCF11-207ENST00000624931 MAP4K4O95819 1239 aaPredicted RBP21.03■□□□□ 0.96
PCF11-207ENST00000624931 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
PCF11-207ENST00000624931 TMEM87AQ8NBN3 555 aa21.03■□□□□ 0.96
PCF11-207ENST00000624931 CAMKK2Q96RR4 588 aa21.03■□□□□ 0.96
PCF11-207ENST00000624931 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
PCF11-207ENST00000624931 CIAO1O76071 339 aa21.02■□□□□ 0.96
PCF11-207ENST00000624931 GTF2E1P29083 439 aaPredicted RBP21.02■□□□□ 0.96
PCF11-207ENST00000624931 IL15P40933 162 aaPredicted RBP21.02■□□□□ 0.96
PCF11-207ENST00000624931 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
PCF11-207ENST00000624931 TAF1P21675 1872 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms