RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 POLR2AP24928 1970 aaKnown RBP17.65■□□□□ 0.42
USH1C-211ENST00000624811 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
USH1C-211ENST00000624811 H7C1D1 291 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 ANP32CO43423 234 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 UFL1O94874 794 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
USH1C-211ENST00000624811 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 ZNF408Q9H9D4 720 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
USH1C-211ENST00000624811 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
USH1C-211ENST00000624811 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
USH1C-211ENST00000624811 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
USH1C-211ENST00000624811 CYP4F22Q6NT55 531 aa17.63■□□□□ 0.41
USH1C-211ENST00000624811 SAMD7Q7Z3H4 446 aa17.63■□□□□ 0.41
USH1C-211ENST00000624811 RTL9Q8NET4 1388 aa17.63■□□□□ 0.41
USH1C-211ENST00000624811 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 G3V3G9 751 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 CELF2O95319 508 aaKnown RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 TBC1D10BQ4KMP7 808 aaPredicted RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 RBM26Q5T8P6 1007 aaKnown RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
USH1C-211ENST00000624811 GGA1Q9UJY5 639 aa17.62■□□□□ 0.41
USH1C-211ENST00000624811 CACNA1FO60840 1977 aa17.61■□□□□ 0.41
USH1C-211ENST00000624811 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
USH1C-211ENST00000624811 WBP1LQ9NX94 342 aa17.61■□□□□ 0.41
USH1C-211ENST00000624811 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
USH1C-211ENST00000624811 EGFRP00533 1210 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 CTSWP56202 376 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 USP48Q86UV5 1035 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 PGAP2Q9UHJ9 254 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 TLL2Q9Y6L7 1015 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 IL16Q14005 1332 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 THSD7BQ9C0I4 1608 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 PSME4Q14997 1843 aa17.6■□□□□ 0.41
USH1C-211ENST00000624811 NEURL1BA8MQ27 555 aa17.59■□□□□ 0.41
USH1C-211ENST00000624811 CTCFP49711 727 aaPredicted RBP17.59■□□□□ 0.41
USH1C-211ENST00000624811 LBX1P52954 281 aa17.59■□□□□ 0.41
USH1C-211ENST00000624811 UBE3BQ7Z3V4 1068 aa17.59■□□□□ 0.41
USH1C-211ENST00000624811 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
USH1C-211ENST00000624811 DPF2Q92785 391 aa17.59■□□□□ 0.41
USH1C-211ENST00000624811 GREM2Q9H772 168 aa17.59■□□□□ 0.41
USH1C-211ENST00000624811 WTIPA6NIX2 430 aaPredicted RBP17.58■□□□□ 0.4
USH1C-211ENST00000624811 AOC2O75106 756 aa17.58■□□□□ 0.4
USH1C-211ENST00000624811 CDC37L1Q7L3B6 337 aa17.58■□□□□ 0.4
USH1C-211ENST00000624811 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
USH1C-211ENST00000624811 XDHP47989 1333 aa17.57■□□□□ 0.4
USH1C-211ENST00000624811 RPS12P25398 132 aaKnown RBP17.57■□□□□ 0.4
USH1C-211ENST00000624811 ECE1P42892 770 aa17.57■□□□□ 0.4
USH1C-211ENST00000624811 EXOSC9Q06265 439 aaKnown RBP17.57■□□□□ 0.4
USH1C-211ENST00000624811 FLIIQ13045 1269 aa17.57■□□□□ 0.4
USH1C-211ENST00000624811 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
USH1C-211ENST00000624811 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
USH1C-211ENST00000624811 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
USH1C-211ENST00000624811 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
USH1C-211ENST00000624811 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
USH1C-211ENST00000624811 SAPCD2Q86UD0 394 aa17.56■□□□□ 0.4
USH1C-211ENST00000624811 FAM9BQ8IZU0 186 aa17.56■□□□□ 0.4
USH1C-211ENST00000624811 ADM5C9JUS6 153 aa17.55■□□□□ 0.4
USH1C-211ENST00000624811 H7C1W4 665 aa17.55■□□□□ 0.4
USH1C-211ENST00000624811 VIL1P09327 827 aaKnown RBP17.55■□□□□ 0.4
USH1C-211ENST00000624811 GCKRQ14397 625 aa17.55■□□□□ 0.4
USH1C-211ENST00000624811 KIF4BQ2VIQ3 1234 aa17.55■□□□□ 0.4
USH1C-211ENST00000624811 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
USH1C-211ENST00000624811 ASTN2O75129 1339 aaPredicted RBP17.54■□□□□ 0.4
USH1C-211ENST00000624811 VAMP4O75379 141 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 KRT26Q7Z3Y9 468 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 DCPSQ96C86 337 aaKnown RBP17.54■□□□□ 0.4
USH1C-211ENST00000624811 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
USH1C-211ENST00000624811 TSKSQ9UJT2 592 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 MINPP1Q9UNW1 487 aa17.54■□□□□ 0.4
USH1C-211ENST00000624811 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
USH1C-211ENST00000624811 RSBN1LQ6PCB5 846 aaPredicted RBP17.53■□□□□ 0.4
USH1C-211ENST00000624811 FBXW7Q969H0 707 aa17.53■□□□□ 0.4
USH1C-211ENST00000624811 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
USH1C-211ENST00000624811 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
USH1C-211ENST00000624811 ZNF646O15015 1829 aaPredicted RBP17.52■□□□□ 0.4
USH1C-211ENST00000624811 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
USH1C-211ENST00000624811 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
USH1C-211ENST00000624811 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
USH1C-211ENST00000624811 GGA3Q9NZ52 723 aa17.52■□□□□ 0.4
USH1C-211ENST00000624811 F6X3S4 739 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 ITGA6P23229 1130 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
USH1C-211ENST00000624811 HUNKP57058 714 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 LINS1Q8NG48 757 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 MXD3Q9BW11 206 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
USH1C-211ENST00000624811 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms