RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TMOD4Q9NZQ9 345 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 STK10O94804 968 aaKnown RBP10.74□□□□□ -0.69
USB1-216ENST00000624720 KCNV1Q6PIU1 500 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 KRT28Q7Z3Y7 464 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 GIMAP7Q8NHV1 300 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 PPM1EQ8WY54 764 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 BICD1Q96G01 975 aa10.74□□□□□ -0.69
USB1-216ENST00000624720 SH3BP5O60239 455 aa10.73□□□□□ -0.69
USB1-216ENST00000624720 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
USB1-216ENST00000624720 IGHDP01880 384 aa10.73□□□□□ -0.69
USB1-216ENST00000624720 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
USB1-216ENST00000624720 TSNAXIP1Q2TAA8 658 aa10.73□□□□□ -0.69
USB1-216ENST00000624720 PIBF1Q8WXW3 757 aa10.73□□□□□ -0.69
USB1-216ENST00000624720 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
USB1-216ENST00000624720 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
USB1-216ENST00000624720 SF3B2Q13435 895 aaKnown RBP10.72□□□□□ -0.69
USB1-216ENST00000624720 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 TEX11Q8IYF3 940 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 TTC30BQ8N4P2 665 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 NEK11Q8NG66 645 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 MICAL1Q8TDZ2 1067 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 DIP2AQ14689 1571 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 XBP1P17861 261 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 MECOMQ03112 1051 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 NFE2L2Q16236 605 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 RBM12BQ8IXT5 1001 aaKnown RBP10.72□□□□□ -0.69
USB1-216ENST00000624720 SSH1Q8WYL5 1049 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 PLEKHG4BQ96PX9 1271 aa10.72□□□□□ -0.69
USB1-216ENST00000624720 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 GRIK3Q13003 919 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 TTLL5Q6EMB2 1281 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 CLEC4GQ6UXB4 293 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 TAF4BQ92750 862 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 KCNB2Q92953 911 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 FAM53CQ9NYF3 392 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 TPX2Q9ULW0 747 aaKnown RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 IBTKQ9P2D0 1353 aaPredicted RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 SNUPNO95149 360 aaKnown RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 FOSBP53539 338 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.69
USB1-216ENST00000624720 LEKR1Q6ZMV7 388 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 TRIM42Q8IWZ5 723 aa10.71□□□□□ -0.69
USB1-216ENST00000624720 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.7
USB1-216ENST00000624720 KIF5CO60282 957 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 CCDC175P0C221 793 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 HOXC9P31274 260 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 SLC7A5Q01650 507 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 AKNAD1Q5T1N1 836 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 ARMC2Q8NEN0 867 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 DNAAF4Q8WXU2 420 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 MRFAP1L1Q96HT8 127 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 C19orf44Q9H6X5 657 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 LMCD1Q9NZU5 365 aa10.71□□□□□ -0.7
USB1-216ENST00000624720 LRRFIP2Q9Y608 721 aaKnown RBP10.71□□□□□ -0.7
USB1-216ENST00000624720 RDXP35241 583 aaKnown RBP10.7□□□□□ -0.7
USB1-216ENST00000624720 ICA1Q05084 483 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 ITPRIPQ8IWB1 547 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
USB1-216ENST00000624720 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
USB1-216ENST00000624720 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 GCP02774 474 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 TRPC1P48995 793 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 CCDC70Q6NSX1 233 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
USB1-216ENST00000624720 C8orf58Q8NAV2 365 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 ST7Q9NRC1 585 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 PDZRN3Q9UPQ7 1066 aa10.7□□□□□ -0.7
USB1-216ENST00000624720 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 PYGLP06737 847 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 MNAT1P51948 309 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 WDR63Q8IWG1 891 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 MAGEC2Q9UBF1 373 aaPredicted RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 PTCH1Q13635 1447 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 TPP2P29144 1249 aaPredicted RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 ABL2P42684 1182 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 CCNHP51946 323 aaPredicted RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 GPS2Q13227 327 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 RTF1Q92541 710 aaKnown RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 G3BP2Q9UN86 482 aaKnown RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 AKAP2Q9Y2D5 859 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 INSRP06213 1382 aa10.69□□□□□ -0.7
USB1-216ENST00000624720 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
USB1-216ENST00000624720 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
USB1-216ENST00000624720 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
USB1-216ENST00000624720 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
USB1-216ENST00000624720 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
USB1-216ENST00000624720 KIF1BPQ96EK5 621 aa10.68□□□□□ -0.7
USB1-216ENST00000624720 UNC45AQ9H3U1 944 aa10.68□□□□□ -0.7
USB1-216ENST00000624720 TMEM165Q9HC07 324 aa10.68□□□□□ -0.7
USB1-216ENST00000624720 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
USB1-216ENST00000624720 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms