RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 CD2BP2O95400 341 aaKnown RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 ITGA6P23229 1130 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 HMGB2P26583 209 aaKnown RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 NPHP1O15259 732 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 TM4SF1P30408 202 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 DDR1Q08345 913 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
ATRX-213ENST00000624032 PLEKHM2Q8IWE5 1019 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 SEC31BQ9NQW1 1179 aa13.99□□□□□ -0.17
ATRX-213ENST00000624032 HSP90AB4PQ58FF6 505 aa13.98□□□□□ -0.17
ATRX-213ENST00000624032 TPTE2Q6XPS3 522 aa13.98□□□□□ -0.17
ATRX-213ENST00000624032 NYXQ9GZU5 481 aa13.98□□□□□ -0.17
ATRX-213ENST00000624032 CARMIL3Q8ND23 1372 aa13.98□□□□□ -0.17
ATRX-213ENST00000624032 TFCP2Q12800 502 aa13.97□□□□□ -0.17
ATRX-213ENST00000624032 TAF7LQ5H9L4 462 aa13.97□□□□□ -0.17
ATRX-213ENST00000624032 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
ATRX-213ENST00000624032 SERPINB2P05120 415 aa13.97□□□□□ -0.17
ATRX-213ENST00000624032 TERF1P54274 439 aa13.97□□□□□ -0.17
ATRX-213ENST00000624032 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
ATRX-213ENST00000624032 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 SLC10A5Q5PT55 438 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 TAF1P21675 1872 aa13.96□□□□□ -0.17
ATRX-213ENST00000624032 EYA2O00167 538 aa13.96□□□□□ -0.18
ATRX-213ENST00000624032 POLRMTO00411 1230 aaKnown RBP13.96□□□□□ -0.18
ATRX-213ENST00000624032 COL4A1P02462 1669 aa13.96□□□□□ -0.18
ATRX-213ENST00000624032 PRR5LQ6MZQ0 368 aa13.96□□□□□ -0.18
ATRX-213ENST00000624032 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.18
ATRX-213ENST00000624032 CCDC125Q86Z20 511 aa13.95□□□□□ -0.18
ATRX-213ENST00000624032 CCDC8Q9H0W5 538 aaPredicted RBP13.95□□□□□ -0.18
ATRX-213ENST00000624032 LAMB2P55268 1798 aa13.95□□□□□ -0.18
ATRX-213ENST00000624032 CASZ1Q86V15 1759 aa13.95□□□□□ -0.18
ATRX-213ENST00000624032 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
ATRX-213ENST00000624032 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
ATRX-213ENST00000624032 ZNF445P59923 1031 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 HS1BP3Q53T59 392 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 AACSQ86V21 672 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATRX-213ENST00000624032 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 PDE1AP54750 535 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
ATRX-213ENST00000624032 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
ATRX-213ENST00000624032 MMP10P09238 476 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
ATRX-213ENST00000624032 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
ATRX-213ENST00000624032 MX1P20591 662 aa13.93□□□□□ -0.18
ATRX-213ENST00000624032 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
ATRX-213ENST00000624032 GSPT1P15170 499 aaKnown RBP13.93□□□□□ -0.18
ATRX-213ENST00000624032 IL15P40933 162 aaPredicted RBP13.93□□□□□ -0.18
ATRX-213ENST00000624032 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
ATRX-213ENST00000624032 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
ATRX-213ENST00000624032 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
ATRX-213ENST00000624032 RIPOR2Q9Y4F9 1068 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 CDC45O75419 566 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 CIAO1O76071 339 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 IFIT2P09913 472 aaKnown RBP13.92□□□□□ -0.18
ATRX-213ENST00000624032 NUCB2P80303 420 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 TIMM10P62072 90 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
ATRX-213ENST00000624032 TTC22Q5TAA0 569 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
ATRX-213ENST00000624032 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
ATRX-213ENST00000624032 ST5P78524 1137 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 RABEP1Q15276 862 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 SLC51AQ86UW1 340 aa13.91□□□□□ -0.18
ATRX-213ENST00000624032 ZSCAN23Q3MJ62 389 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
ATRX-213ENST00000624032 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
ATRX-213ENST00000624032 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
ATRX-213ENST00000624032 DBNDD2Q9BQY9 259 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 PARP3Q9Y6F1 533 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.18
ATRX-213ENST00000624032 SNAP23O00161 211 aa13.89□□□□□ -0.19
ATRX-213ENST00000624032 ZNF500O60304 480 aaPredicted RBP13.89□□□□□ -0.19
ATRX-213ENST00000624032 IGHMBP2P38935 993 aaKnown RBP13.89□□□□□ -0.19
ATRX-213ENST00000624032 OSBPL3Q9H4L5 887 aa13.89□□□□□ -0.19
ATRX-213ENST00000624032 STAP2Q9UGK3 403 aa13.89□□□□□ -0.19
ATRX-213ENST00000624032 DBNLQ9UJU6 430 aaKnown RBP13.89□□□□□ -0.19
ATRX-213ENST00000624032 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
ATRX-213ENST00000624032 TAF5LO75529 589 aa13.89□□□□□ -0.19
ATRX-213ENST00000624032 RBM10P98175 930 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms