RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
AP000542.3-201ENST00000623391 TRIM35Q9UPQ4 493 aa10.24□□□□□ -0.77
AP000542.3-201ENST00000623391 CCDC66A2RUB6 948 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 SSH2Q76I76 1423 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 SPHKAPQ2M3C7 1700 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 MAGEB6P1A0A0J9YX57 407 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 TOP1P11387 765 aaKnown RBP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CETN2P41208 172 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 NMIQ13287 307 aaPredicted RBP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 EYA3Q99504 573 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 SLC4A4Q9Y6R1 1079 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 C6orf229H3BNL8 230 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 YEATS4O95619 227 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CYP7A1P22680 504 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CCDC102BQ68D86 513 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 NFATC2IPQ8NCF5 419 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 ERMNQ8TAM6 284 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CTAGE1Q96RT6 745 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 DENND2AQ9ULE3 1009 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 TRPM1Q7Z4N2 1603 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 SSBP05455 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 RTN1Q16799 776 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 BRAPQ7Z569 592 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 RBM17Q96I25 401 aaKnown RBP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 CALML3P27482 149 aa10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 NAA16Q6N069 864 aaPredicted RBP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 RTCBQ9Y3I0 505 aaKnown RBP10.23□□□□□ -0.77
AP000542.3-201ENST00000623391 IRS4O14654 1257 aaPredicted RBP10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 ARHGAP29Q52LW3 1261 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 LRSAM1Q6UWE0 723 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 KLF18A0A0U1RQI7 1052 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 KIF5CO60282 957 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 RUFY3Q7L099 469 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 TSPYL6Q8N831 410 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 CNKSR2Q8WXI2 1034 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 CDK12Q9NYV4 1490 aaPredicted RBP10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 NPHP4O75161 1426 aaPredicted RBP10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
AP000542.3-201ENST00000623391 USO1O60763 962 aaKnown RBP10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 CHMLP26374 656 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 LMTK2Q8IWU2 1503 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 F13A1P00488 732 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 SLC26A6Q9BXS9 759 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 KDRP35968 1356 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 TSPY3P0CV98 308 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 TSPY8P0CW00 308 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 SPAG1Q07617 926 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 CETN1Q12798 172 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 SLC39A6Q13433 755 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 CAMK4Q16566 473 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 MAP9Q49MG5 647 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 TTLL5Q6EMB2 1281 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 LLPHQ9BRT6 129 aaKnown RBP10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 SETBP1Q9Y6X0 1596 aa10.21□□□□□ -0.77
AP000542.3-201ENST00000623391 ABCC4O15439 1325 aa10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 CCT2P78371 535 aaKnown RBP10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 LEKR1Q6ZMV7 388 aa10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.78
AP000542.3-201ENST00000623391 CASQ1P31415 396 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 CREB3L3Q68CJ9 461 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 BICC1Q9H694 974 aaKnown RBP10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 PDE8AO60658 829 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 Q6ZUG5 572 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 MAST3O60307 1309 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 RAB3GAP1Q15042 981 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 ALG1Q9BT22 464 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 PPP1R1BQ9UD71 204 aaPredicted RBP10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 UBAP1LF5GYI3 381 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 EYA2O00167 538 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 TFCP2Q12800 502 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 PPP2R5BQ15173 497 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 CCDC172P0C7W6 258 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 RLBP1P12271 317 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 FBLN1P23142 703 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 PPP1R2P41236 205 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 BRF1Q92994 677 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 MROH5Q6ZUA9 1318 aa10.2□□□□□ -0.78
AP000542.3-201ENST00000623391 CDC42BPBQ9Y5S2 1711 aa10.19□□□□□ -0.78
AP000542.3-201ENST00000623391 PRC1O43663 620 aa10.19□□□□□ -0.78
AP000542.3-201ENST00000623391 PUM3Q15397 648 aaKnown RBP10.19□□□□□ -0.78
AP000542.3-201ENST00000623391 SLC9C2Q5TAH2 1124 aa10.19□□□□□ -0.78
AP000542.3-201ENST00000623391 ADGRL3Q9HAR2 1447 aa10.19□□□□□ -0.78
AP000542.3-201ENST00000623391 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms