RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
PSME3-217ENST00000622892 ZNF771Q7L3S4 317 aaPredicted RBP15.33■□□□□ 0.04
PSME3-217ENST00000622892 FILIP1Q7Z7B0 1213 aa15.33■□□□□ 0.04
PSME3-217ENST00000622892 ZCRB1Q8TBF4 217 aaKnown RBP15.33■□□□□ 0.04
PSME3-217ENST00000622892 KCNB2Q92953 911 aa15.33■□□□□ 0.04
PSME3-217ENST00000622892 FTOQ9C0B1 505 aaKnown RBP eCLIP15.33■□□□□ 0.04
PSME3-217ENST00000622892 ELP1O95163 1332 aa15.33■□□□□ 0.04
PSME3-217ENST00000622892 SASH1O94885 1247 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
PSME3-217ENST00000622892 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
PSME3-217ENST00000622892 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 TTC5Q8N0Z6 440 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 BRF1Q92994 677 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 CTNNA3Q9UI47 895 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 USP16Q9Y5T5 823 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 ADCY9O60503 1353 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 IL2RBP14784 551 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
PSME3-217ENST00000622892 TOM1O60784 492 aa15.31■□□□□ 0.04
PSME3-217ENST00000622892 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.048e-6■■□□□ 11.5
PSME3-217ENST00000622892 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
PSME3-217ENST00000622892 TDRD7Q8NHU6 1098 aaKnown RBP15.31■□□□□ 0.04
PSME3-217ENST00000622892 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
PSME3-217ENST00000622892 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
PSME3-217ENST00000622892 H3BQV1 296 aa15.31■□□□□ 0.04
PSME3-217ENST00000622892 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
PSME3-217ENST00000622892 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
PSME3-217ENST00000622892 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
PSME3-217ENST00000622892 KIF20AO95235 890 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 OGFRQ9NZT2 677 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 RNF20Q5VTR2 975 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 FAM208AQ9UK61 1670 aaKnown RBP15.3■□□□□ 0.04
PSME3-217ENST00000622892 ZNF790Q6PG37 636 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 FEZ1Q99689 392 aa15.3■□□□□ 0.04
PSME3-217ENST00000622892 BICC1Q9H694 974 aaKnown RBP15.3■□□□□ 0.04
PSME3-217ENST00000622892 COL5A2P05997 1499 aaPredicted RBP15.29■□□□□ 0.04
PSME3-217ENST00000622892 CCDC129Q6ZRS4 1044 aa15.29■□□□□ 0.04
PSME3-217ENST00000622892 KDM6AO15550 1401 aaPredicted RBP15.29■□□□□ 0.04
PSME3-217ENST00000622892 LRRC8AQ8IWT6 810 aa15.29■□□□□ 0.04
PSME3-217ENST00000622892 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
PSME3-217ENST00000622892 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
PSME3-217ENST00000622892 SKILP12757 684 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 FGD1P98174 961 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 KAZALD1Q96I82 304 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
PSME3-217ENST00000622892 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
PSME3-217ENST00000622892 CPDO75976 1380 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 BECN2A8MW95 431 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 MTX1Q13505 466 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 RBM43Q6ZSC3 357 aaKnown RBP15.28■□□□□ 0.04
PSME3-217ENST00000622892 PAXBP1Q9Y5B6 917 aa15.28■□□□□ 0.04
PSME3-217ENST00000622892 GIGYF1O75420 1035 aaPredicted RBP15.27■□□□□ 0.04
PSME3-217ENST00000622892 GUCY1B3Q02153 619 aa15.27■□□□□ 0.04
PSME3-217ENST00000622892 IQCB1Q15051 598 aa15.27■□□□□ 0.04
PSME3-217ENST00000622892 Q6ZUG5 572 aa15.27■□□□□ 0.04
PSME3-217ENST00000622892 BABAM1Q9NWV8 329 aa15.27■□□□□ 0.04
PSME3-217ENST00000622892 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.04
PSME3-217ENST00000622892 FAM182BQ5T319 152 aa15.27■□□□□ 0.03
PSME3-217ENST00000622892 RESTQ13127 1097 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 PTPN14Q15678 1187 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.26■□□□□ 0.03
PSME3-217ENST00000622892 TAF5LO75529 589 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 CCAR1Q8IX12 1150 aaKnown RBP15.26■□□□□ 0.03
PSME3-217ENST00000622892 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
PSME3-217ENST00000622892 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
PSME3-217ENST00000622892 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 HIP1O00291 1037 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 EP400Q96L91 3159 aa15.26■□□□□ 0.03
PSME3-217ENST00000622892 COL18A1P39060 1754 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 KMT5BQ4FZB7 885 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 GTF3C6Q969F1 213 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 GOLPH3LQ9H4A5 285 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 GRM8O00222 908 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 KIF18AQ8NI77 898 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 CARD10Q9BWT7 1032 aa15.25■□□□□ 0.03
PSME3-217ENST00000622892 CCT2P78371 535 aaKnown RBP15.24■□□□□ 0.03
PSME3-217ENST00000622892 ELF2Q15723 593 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 DNAJC2Q99543 621 aaKnown RBP15.24■□□□□ 0.03
PSME3-217ENST00000622892 LTBP4Q8N2S1 1624 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 ST7Q9NRC1 585 aa15.24■□□□□ 0.03
PSME3-217ENST00000622892 SCRN1Q12765 414 aa15.23■□□□□ 0.03
PSME3-217ENST00000622892 CFAP45Q9UL16 551 aa15.23■□□□□ 0.03
PSME3-217ENST00000622892 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms