RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 FAM227BQ96M60 508 aa15.28■□□□□ 0.04
CHD1L-210ENST00000622533 CCDC69A6NI79 296 aa15.27■□□□□ 0.04
CHD1L-210ENST00000622533 POLR3GO15318 223 aaPredicted RBP15.27■□□□□ 0.04
CHD1L-210ENST00000622533 SLC20A2Q08357 652 aa15.27■□□□□ 0.04
CHD1L-210ENST00000622533 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
CHD1L-210ENST00000622533 CLSTN2Q9H4D0 955 aa15.27■□□□□ 0.04
CHD1L-210ENST00000622533 SASH1O94885 1247 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 MPRIPQ6WCQ1 1025 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 RBM43Q6ZSC3 357 aaKnown RBP15.27■□□□□ 0.03
CHD1L-210ENST00000622533 BICD2Q8TD16 824 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 EAF2Q96CJ1 260 aaPredicted RBP15.27■□□□□ 0.03
CHD1L-210ENST00000622533 FEZ2Q9UHY8 353 aaPredicted RBP15.27■□□□□ 0.03
CHD1L-210ENST00000622533 FHOD1Q9Y613 1164 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 RFX7Q2KHR2 1363 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 SUCLG2Q96I99 432 aa15.27■□□□□ 0.03
CHD1L-210ENST00000622533 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.03
CHD1L-210ENST00000622533 MRC1P22897 1456 aa15.26■□□□□ 0.03
CHD1L-210ENST00000622533 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 GOLGA6L19H0YKK7 550 aa15.26■□□□□ 0.03
CHD1L-210ENST00000622533 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
CHD1L-210ENST00000622533 BMS1Q14692 1282 aaKnown RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 C11orf57Q6ZUT1 292 aaPredicted RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 TCEANC2Q96MN5 208 aa15.26■□□□□ 0.03
CHD1L-210ENST00000622533 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 CLCN6P51797 869 aa15.26■□□□□ 0.03
CHD1L-210ENST00000622533 CWF19L2Q2TBE0 894 aaKnown RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 CCAR2Q8N163 923 aaKnown RBP15.26■□□□□ 0.03
CHD1L-210ENST00000622533 CCZ1BP86790 482 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 CCZ1P86791 482 aaPredicted RBP15.25■□□□□ 0.03
CHD1L-210ENST00000622533 LARP1Q6PKG0 1096 aaKnown RBP15.25■□□□□ 0.03
CHD1L-210ENST00000622533 FBXW7Q969H0 707 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.25■□□□□ 0.03
CHD1L-210ENST00000622533 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 PLA2G4AP47712 749 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 NEXNQ0ZGT2 675 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
CHD1L-210ENST00000622533 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
CHD1L-210ENST00000622533 ZSCAN16Q9H4T2 348 aaPredicted RBP15.25■□□□□ 0.03
CHD1L-210ENST00000622533 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
CHD1L-210ENST00000622533 GORABQ5T7V8 394 aa15.24■□□□□ 0.03
CHD1L-210ENST00000622533 USPL1Q5W0Q7 1092 aa15.24■□□□□ 0.03
CHD1L-210ENST00000622533 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
CHD1L-210ENST00000622533 PNMA6AP0CW24 399 aaPredicted RBP15.24■□□□□ 0.03
CHD1L-210ENST00000622533 H2AFXP16104 143 aaPredicted RBP15.24■□□□□ 0.03
CHD1L-210ENST00000622533 CFAP45Q9UL16 551 aa15.24■□□□□ 0.03
CHD1L-210ENST00000622533 PSME1Q06323 249 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 IQCB1Q15051 598 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 PROSER3Q2NL68 480 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 BOLA2Q9H3K6 86 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 CDC25BP30305 580 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 KAZALD1Q96I82 304 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 CEBPZQ03701 1054 aaKnown RBP15.23■□□□□ 0.03
CHD1L-210ENST00000622533 STK3Q13188 491 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 ARHGAP29Q52LW3 1261 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 SYT10Q6XYQ8 523 aa15.23■□□□□ 0.03
CHD1L-210ENST00000622533 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
CHD1L-210ENST00000622533 TAF5LO75529 589 aa15.22■□□□□ 0.03
CHD1L-210ENST00000622533 ATP5JP18859 108 aa15.22■□□□□ 0.03
CHD1L-210ENST00000622533 ST5P78524 1137 aa15.22■□□□□ 0.03
CHD1L-210ENST00000622533 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
CHD1L-210ENST00000622533 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
CHD1L-210ENST00000622533 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 CTAGE5O15320 804 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 SNW1Q13573 536 aaKnown RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 TICAM2Q86XR7 235 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 ERCC4Q92889 916 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 DDX11Q96FC9 970 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 NEK1Q96PY6 1258 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 LLPHQ9BRT6 129 aaKnown RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 PXDNQ92626 1479 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 RGPD2P0DJD1 1756 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
CHD1L-210ENST00000622533 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
CHD1L-210ENST00000622533 BECN2A8MW95 431 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 H3BQV1 296 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 NEMFO60524 1076 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 HMGB1P09429 215 aaKnown RBP15.2■□□□□ 0.02
CHD1L-210ENST00000622533 IFFO2Q5TF58 517 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
CHD1L-210ENST00000622533 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 FER1L4A9Z1Z3 1794 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 ADAMTS7Q9UKP4 1686 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
CHD1L-210ENST00000622533 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 TMX1Q9H3N1 280 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
CHD1L-210ENST00000622533 RESTQ13127 1097 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 KRBA2Q6ZNG9 492 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
CHD1L-210ENST00000622533 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
CHD1L-210ENST00000622533 SARM1Q6SZW1 724 aa15.19■□□□□ 0.02
CHD1L-210ENST00000622533 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
CHD1L-210ENST00000622533 SIL1Q9H173 461 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms