RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 SKIDA1Q1XH10 827 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 IFFO2Q5TF58 517 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 DHX40Q8IX18 779 aaKnown RBP25.38■■□□□ 1.65
PCSK6-220ENST00000622483 ELP1O95163 1332 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 CCAR1Q8IX12 1150 aaKnown RBP25.37■■□□□ 1.65
PCSK6-220ENST00000622483 GOLPH3LQ9H4A5 285 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 FLT4P35916 1363 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 BRF1Q92994 677 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 ZNF142P52746 1687 aaPredicted RBP25.37■■□□□ 1.65
PCSK6-220ENST00000622483 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 ZSWIM4Q9H7M6 989 aa25.37■■□□□ 1.65
PCSK6-220ENST00000622483 PHAXQ9H814 394 aaKnown RBP25.37■■□□□ 1.65
PCSK6-220ENST00000622483 GUCY1B3Q02153 619 aa25.36■■□□□ 1.65
PCSK6-220ENST00000622483 ARMCX5Q6P1M9 558 aa25.36■■□□□ 1.65
PCSK6-220ENST00000622483 NBPF11Q86T75 865 aa25.36■■□□□ 1.65
PCSK6-220ENST00000622483 IFNKQ9P0W0 207 aa25.36■■□□□ 1.65
PCSK6-220ENST00000622483 NBPF7P0C2Y1 421 aaPredicted RBP25.35■■□□□ 1.65
PCSK6-220ENST00000622483 RBM43Q6ZSC3 357 aaKnown RBP25.35■■□□□ 1.65
PCSK6-220ENST00000622483 SIL1Q9H173 461 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 ORC3Q9UBD5 711 aaPredicted RBP25.35■■□□□ 1.65
PCSK6-220ENST00000622483 STX1AQ16623 288 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 AKAP12Q02952 1782 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 CDK12Q9NYV4 1490 aaPredicted RBP25.35■■□□□ 1.65
PCSK6-220ENST00000622483 NEMFO60524 1076 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 CDC25BP30305 580 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 TPM4P67936 248 aa25.35■■□□□ 1.65
PCSK6-220ENST00000622483 XPO4Q9C0E2 1151 aaKnown RBP25.35■■□□□ 1.65
PCSK6-220ENST00000622483 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
PCSK6-220ENST00000622483 PDCP20941 246 aa25.34■■□□□ 1.65
PCSK6-220ENST00000622483 ARGLU1Q9NWB6 273 aaPredicted RBP25.34■■□□□ 1.65
PCSK6-220ENST00000622483 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 CSB-PGBD3P0DP91 1061 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 HSP90B1P14625 803 aaKnown RBP25.33■■□□□ 1.65
PCSK6-220ENST00000622483 CADPS2Q86UW7 1296 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 L2HGDHQ9H9P8 463 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 ANKARQ7Z5J8 1434 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 LMTK3Q96Q04 1460 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 FANCGO15287 622 aa25.33■■□□□ 1.65
PCSK6-220ENST00000622483 SBNO1A3KN83 1393 aa25.33■■□□□ 1.64
PCSK6-220ENST00000622483 ZRANB2O95218 330 aaKnown RBP eCLIP25.32■■□□□ 1.64
PCSK6-220ENST00000622483 EIF2S2P20042 333 aaKnown RBP25.32■■□□□ 1.64
PCSK6-220ENST00000622483 SFPQP23246 707 aaKnown RBP eCLIP25.32■■□□□ 1.642e-6■■■□□ 17.5
PCSK6-220ENST00000622483 SMC1AQ14683 1233 aaKnown RBP25.32■■□□□ 1.64
PCSK6-220ENST00000622483 BLOC1S2Q6QNY1 142 aa25.32■■□□□ 1.64
PCSK6-220ENST00000622483 TSPYL1Q9H0U9 437 aa25.32■■□□□ 1.64
PCSK6-220ENST00000622483 NLRP2Q9NX02 1062 aa25.32■■□□□ 1.64
PCSK6-220ENST00000622483 PA2G4Q9UQ80 394 aaKnown RBP25.32■■□□□ 1.64
PCSK6-220ENST00000622483 TXLNBQ8N3L3 684 aa25.32■■□□□ 1.64
PCSK6-220ENST00000622483 DHX16O60231 1041 aaKnown RBP25.32■■□□□ 1.64
PCSK6-220ENST00000622483 PEAK1Q9H792 1746 aa25.32■■□□□ 1.64
PCSK6-220ENST00000622483 PIK3C2AO00443 1686 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 ANXA1P04083 346 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 SARM1Q6SZW1 724 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 ANKRD26Q9UPS8 1709 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 EVCP57679 992 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 BRINP3Q76B58 766 aa25.31■■□□□ 1.64
PCSK6-220ENST00000622483 NECTIN1Q15223 517 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 CCDC93Q567U6 631 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 SLAIN2Q9P270 581 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 TOPAZ1Q8N9V7 1692 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 KINO60870 393 aaKnown RBP25.3■■□□□ 1.64
PCSK6-220ENST00000622483 RNF20Q5VTR2 975 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 SDF4Q9BRK5 362 aa25.3■■□□□ 1.64
PCSK6-220ENST00000622483 LOC102724159A0A0B4J2E5 919 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 SLC27A2O14975 620 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 ME1P48163 572 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 PWP2Q15269 919 aaKnown RBP25.29■■□□□ 1.64
PCSK6-220ENST00000622483 HSP90AA4PQ58FG1 418 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 TBC1D8O95759 1140 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 NMIQ13287 307 aaPredicted RBP25.29■■□□□ 1.64
PCSK6-220ENST00000622483 FOXR1Q6PIV2 292 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 RGS22Q8NE09 1264 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 SSH3Q8TE77 659 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 ANKRD24Q8TF21 1146 aa25.29■■□□□ 1.64
PCSK6-220ENST00000622483 LMOD1P29536 600 aaPredicted RBP25.28■■□□□ 1.64
PCSK6-220ENST00000622483 GTF2A1P52655 376 aaPredicted RBP25.28■■□□□ 1.64
PCSK6-220ENST00000622483 TOB2Q14106 344 aaPredicted RBP25.28■■□□□ 1.64
PCSK6-220ENST00000622483 RUFY2Q8WXA3 655 aa25.28■■□□□ 1.64
PCSK6-220ENST00000622483 PLEKHA4Q9H4M7 779 aa25.28■■□□□ 1.64
PCSK6-220ENST00000622483 DPCR1Q3MIW9 517 aa25.28■■□□□ 1.64
PCSK6-220ENST00000622483 CCDC73Q6ZRK6 1079 aa25.28■■□□□ 1.64
PCSK6-220ENST00000622483 CEP57L1Q8IYX8 460 aa25.28■■□□□ 1.64
PCSK6-220ENST00000622483 FMN2Q9NZ56 1722 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 FSIP1Q8NA03 581 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 A0A1B0GVL5 298 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 CHGBP05060 677 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 GPS2Q13227 327 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 IP6K1Q92551 441 aa25.27■■□□□ 1.64
PCSK6-220ENST00000622483 UTP14AQ9BVJ6 771 aaKnown RBP25.27■■□□□ 1.64
PCSK6-220ENST00000622483 SEC62Q99442 399 aaKnown RBP25.26■■□□□ 1.63
PCSK6-220ENST00000622483 ADCY9O60503 1353 aa25.26■■□□□ 1.63
PCSK6-220ENST00000622483 EDC3Q96F86 508 aaKnown RBP25.26■■□□□ 1.63
PCSK6-220ENST00000622483 RRP15Q9Y3B9 282 aaKnown RBP25.26■■□□□ 1.63
PCSK6-220ENST00000622483 REXO1L1PQ8IX06 675 aa25.26■■□□□ 1.63
PCSK6-220ENST00000622483 CCDC8Q9H0W5 538 aaPredicted RBP25.26■■□□□ 1.63
PCSK6-220ENST00000622483 STRCP1A6NGW2 1772 aa25.25■■□□□ 1.63
PCSK6-220ENST00000622483 A0A0D9SFI3 127 aa25.25■■□□□ 1.63
PCSK6-220ENST00000622483 NOP2P46087 812 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms