RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 CYP21A2P08686 494 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 LIG1P18858 919 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 MAP3K11Q16584 847 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 CCDC191Q8NCU4 936 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 CLSTN2Q9H4D0 955 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
IGHV3-54-201ENST00000622166 WDR17Q8IZU2 1322 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 EYA2O00167 538 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 CCDC129Q6ZRS4 1044 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 DHX32Q7L7V1 743 aaKnown RBP11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 FERMT3Q86UX7 667 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 UBE2Q2Q8WVN8 375 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 BRF1Q92994 677 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 SPATA32Q96LK8 384 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 SEC62Q99442 399 aaKnown RBP11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 SPTLC3Q9NUV7 552 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 PAG1Q9NWQ8 432 aa11.37□□□□□ -0.59
IGHV3-54-201ENST00000622166 DYNC1I1O14576 645 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 AP5Z1O43299 807 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 JAK2O60674 1132 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 DTNBO60941 627 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 HMGN5P82970 282 aaKnown RBP11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 TYRO3Q06418 890 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 STK3Q13188 491 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 ATL3Q6DD88 541 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 FAM173BQ6P4H8 233 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 FBXL16Q8N461 479 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 PGBD1Q96JS3 809 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 MRVI1Q9Y6F6 885 aa11.36□□□□□ -0.59
IGHV3-54-201ENST00000622166 RNF113AO15541 343 aaKnown RBP11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 SCRN1Q12765 414 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 TNMDQ9H2S6 317 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 TFIP11Q9UBB9 837 aaKnown RBP11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 RCOR1Q9UKL0 485 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
IGHV3-54-201ENST00000622166 COL5A2P05997 1499 aaPredicted RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 UQCRHLA0A096LP55 91 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 GOLGA6L6A8MZA4 724 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 GOLIM4O00461 696 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 CAVIN2O95810 425 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 A1BGP04217 495 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 UQCRHP07919 91 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 ADD1P35611 737 aaKnown RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 EVCP57679 992 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 TDRD7Q8NHU6 1098 aaKnown RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 PRIMPOLQ96LW4 560 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 PLA2G12BQ9BX93 195 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 DACT1Q9NYF0 836 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 DDX60Q8IY21 1712 aaKnown RBP11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
IGHV3-54-201ENST00000622166 NWD2Q9ULI1 1742 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 E7EWF7 191 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 H3BQV1 296 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CHGBP05060 677 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 IFIT1P09914 478 aaKnown RBP11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 TIMM10P62072 90 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 TCIRG1Q13488 830 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 LRRFIP1Q32MZ4 808 aaKnown RBP11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CBX8Q9HC52 389 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CEP126Q9P2H0 1117 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 CHMP3Q9Y3E7 222 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 MAST3O60307 1309 aa11.33□□□□□ -0.6
IGHV3-54-201ENST00000622166 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
IGHV3-54-201ENST00000622166 A0A1B0GUL7 405 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms