RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 HOXC9P31274 260 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 FOXD4L6Q3SYB3 417 aaPredicted RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 CCDC158Q5M9N0 1113 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 FOXD4L3Q6VB84 417 aaPredicted RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 TADA2BQ86TJ2 420 aa8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 NGDNQ8NEJ9 315 aaKnown RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 CACTINQ8WUQ7 758 aaKnown RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 LTV1Q96GA3 475 aaPredicted RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 ORC3Q9UBD5 711 aaPredicted RBP8.74□□□□□ -1.01
TRIM49B-202ENST00000622138 A0A087WUV0 522 aaPredicted RBP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 SMC2O95347 1197 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 IRX1P78414 480 aaPredicted RBP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 PPP2R5AQ15172 486 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 DNAAF4Q8WXU2 420 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 ATP6V1DQ9Y5K8 247 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 SOS1Q07889 1333 aaPredicted RBP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 TBC1D8O95759 1140 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 ERCC3P19447 782 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 GIMAP6Q6P9H5 292 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 CCAR2Q8N163 923 aaKnown RBP8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 CLIP2Q9UDT6 1046 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 ADAM21Q9UKJ8 722 aa8.73□□□□□ -1.01
TRIM49B-202ENST00000622138 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 KCNJ6P48051 423 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 EIF5P55010 431 aaKnown RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 NLRP6P59044 892 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 LRRC8AQ8IWT6 810 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 PI4K2BQ8TCG2 481 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 SSH3Q8TE77 659 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 UBXN4Q92575 508 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 TRIM5Q9C035 493 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 CACNA1FO60840 1977 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 CRYBG1Q9Y4K1 1723 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 MED1Q15648 1581 aaPredicted RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 H0YHG0 523 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 DTNBO60941 627 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 CAVIN2O95810 425 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 ANAPC15P60006 121 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 SARNPP82979 210 aaKnown RBP8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 POLA2Q14181 598 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 PPP1R42Q7Z4L9 355 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 ARHGAP23Q9P227 1491 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 AOX1Q06278 1338 aa8.72□□□□□ -1.01
TRIM49B-202ENST00000622138 USP54Q70EL1 1684 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 SLIT1O75093 1534 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 USP27XA6NNY8 438 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 HSPA4P34932 840 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 BIRC2Q13490 618 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 MAP3K11Q16584 847 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 HDGFL1Q5TGJ6 251 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 CC2D1AQ6P1N0 951 aaPredicted RBP8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 PLPPR3Q6T4P5 718 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 MRFAP1L1Q96HT8 127 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 LARP6Q9BRS8 491 aaKnown RBP8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 NRBP1Q9UHY1 535 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 MRVI1Q9Y6F6 885 aa8.71□□□□□ -1.01
TRIM49B-202ENST00000622138 EFCAB8A8MWE9 144 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 KCNQ3O43525 872 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 ANXA1P04083 346 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 NBPF7P0C2Y1 421 aaPredicted RBP8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 TYRO3Q06418 890 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 DHX8Q14562 1220 aaKnown RBP8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 TAF7Q15545 349 aaPredicted RBP8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 RASEFQ8IZ41 740 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 FAM212AQ96EL1 285 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 UTP14AQ9BVJ6 771 aaKnown RBP8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
TRIM49B-202ENST00000622138 PHLPP2Q6ZVD8 1323 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 LTN1O94822 1766 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 KDM3BQ7LBC6 1761 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 TADA3O75528 432 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 SURF6O75683 361 aaKnown RBP8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 SASH3O75995 380 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 CCZ1BP86790 482 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 JAKMIP3Q5VZ66 844 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 FMNL3Q8IVF7 1028 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 GIMAP7Q8NHV1 300 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 LSG1Q9H089 658 aaKnown RBP8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 PDRG1Q9NUG6 133 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 SNX14Q9Y5W7 946 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 TTC41PQ6P2S7 1318 aa8.7□□□□□ -1.02
TRIM49B-202ENST00000622138 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 ZSCAN22P10073 491 aaPredicted RBP8.69□□□□□ -1.02
TRIM49B-202ENST00000622138 SKILP12757 684 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms