RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 USP17L18D6R9N7 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L22D6RA61 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L19D6RCP7 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L20D6RJB6 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 CENPCQ03188 943 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 USP17L24Q0WX57 530 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 MEX3CQ5U5Q3 659 aaKnown RBP11.21□□□□□ -0.61
TARDBP-224ENST00000621573 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
TARDBP-224ENST00000621573 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 SLC12A5Q9H2X9 1139 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 DNMT3LQ9UJW3 386 aa11.21□□□□□ -0.61
TARDBP-224ENST00000621573 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 FIGNL2A6NMB9 653 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 SOBPA7XYQ1 873 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 GPC1P35052 558 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-224ENST00000621573 HDGFL2Q7Z4V5 671 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-224ENST00000621573 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 SERTAD1Q9UHV2 236 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-224ENST00000621573 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
TARDBP-224ENST00000621573 PXDNQ92626 1479 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 SBNO1A3KN83 1393 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-224ENST00000621573 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 MAN1A2O60476 641 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
TARDBP-224ENST00000621573 RGPD8O14715 1765 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-224ENST00000621573 NHSL1Q5SYE7 1610 aa11.18□□□□□ -0.62
TARDBP-224ENST00000621573 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
TARDBP-224ENST00000621573 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
TARDBP-224ENST00000621573 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-224ENST00000621573 GRIP2Q9C0E4 1043 aa11.18□□□□□ -0.62
TARDBP-224ENST00000621573 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
TARDBP-224ENST00000621573 ARHGEF10O15013 1369 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 ADAMTS2O95450 1211 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 DPYDQ12882 1025 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 TLR1Q15399 786 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 ABTB2Q8N961 1025 aa11.17□□□□□ -0.62
TARDBP-224ENST00000621573 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
TARDBP-224ENST00000621573 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
TARDBP-224ENST00000621573 SMTNP53814 917 aa11.16□□□□□ -0.62
TARDBP-224ENST00000621573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.16□□□□□ -0.62
TARDBP-224ENST00000621573 ARXQ96QS3 562 aa11.16□□□□□ -0.62
TARDBP-224ENST00000621573 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
TARDBP-224ENST00000621573 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
TARDBP-224ENST00000621573 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 BACH1O14867 736 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 ATG7O95352 703 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.15□□□□□ -0.62
TARDBP-224ENST00000621573 LYSMD3Q7Z3D4 306 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 PRICKLE2Q7Z3G6 844 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 NOVA2Q9UNW9 492 aaKnown RBP11.15□□□□□ -0.62
TARDBP-224ENST00000621573 USP6P35125 1406 aa11.15□□□□□ -0.62
TARDBP-224ENST00000621573 BRD4O60885 1362 aaPredicted RBP11.15□□□□□ -0.63
TARDBP-224ENST00000621573 SEC13P55735 322 aa11.14□□□□□ -0.63
TARDBP-224ENST00000621573 MTFR1Q15390 333 aa11.14□□□□□ -0.63
TARDBP-224ENST00000621573 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
TARDBP-224ENST00000621573 ZSCAN10Q96SZ4 725 aaPredicted RBP11.14□□□□□ -0.63
TARDBP-224ENST00000621573 ZMIZ1Q9ULJ6 1067 aa11.14□□□□□ -0.63
TARDBP-224ENST00000621573 ITSN1Q15811 1721 aa11.14□□□□□ -0.63
TARDBP-224ENST00000621573 CPSF1Q10570 1443 aaKnown RBP11.13□□□□□ -0.63
TARDBP-224ENST00000621573 A6NJY4 79 aa11.13□□□□□ -0.63
TARDBP-224ENST00000621573 M0R2N6 131 aa11.13□□□□□ -0.63
TARDBP-224ENST00000621573 EPHA4P54764 986 aa11.13□□□□□ -0.63
TARDBP-224ENST00000621573 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
TARDBP-224ENST00000621573 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
TARDBP-224ENST00000621573 TSEN2Q8NCE0 465 aaKnown RBP11.13□□□□□ -0.63
TARDBP-224ENST00000621573 NGLY1Q96IV0 654 aa11.13□□□□□ -0.63
TARDBP-224ENST00000621573 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
TARDBP-224ENST00000621573 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
TARDBP-224ENST00000621573 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
TARDBP-224ENST00000621573 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
TARDBP-224ENST00000621573 LRP6O75581 1613 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 RHOQP17081 205 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 POU4F2Q12837 409 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 TMEM214Q6NUQ4 689 aaKnown RBP11.11□□□□□ -0.63
TARDBP-224ENST00000621573 NME9Q86XW9 330 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 SCHIP1Q9P0W5 487 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-224ENST00000621573 IQSEC3Q9UPP2 1182 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-224ENST00000621573 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 ANKRD36BQ8N2N9 1353 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-224ENST00000621573 SHPRHQ149N8 1683 aa11.11□□□□□ -0.63
TARDBP-224ENST00000621573 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
TARDBP-224ENST00000621573 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
TARDBP-224ENST00000621573 ZC3H6P61129 1189 aaKnown RBP11.1□□□□□ -0.63
TARDBP-224ENST00000621573 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
TARDBP-224ENST00000621573 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
TARDBP-224ENST00000621573 AFF2P51816 1311 aa11.09□□□□□ -0.63
TARDBP-224ENST00000621573 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
TARDBP-224ENST00000621573 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms