RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 STK3Q13188 491 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 ATP2B3Q16720 1220 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 UBR2Q8IWV8 1755 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 PTCD1O75127 700 aaKnown RBP9.57□□□□□ -0.88
GDNF-208ENST00000620847 CHGBP05060 677 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 CYP21A2P08686 494 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 SEC62Q99442 399 aaKnown RBP9.57□□□□□ -0.88
GDNF-208ENST00000620847 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
GDNF-208ENST00000620847 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 TAF3Q5VWG9 929 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 Q6ZUG5 572 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 C17orf53Q8N3J3 647 aaPredicted RBP9.56□□□□□ -0.88
GDNF-208ENST00000620847 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
GDNF-208ENST00000620847 DNAJC2Q99543 621 aaKnown RBP9.56□□□□□ -0.88
GDNF-208ENST00000620847 FAM177BA6PVY3 158 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 GOLGA6L6A8MZA4 724 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 FOXO4P98177 505 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 RBM43Q6ZSC3 357 aaKnown RBP9.56□□□□□ -0.88
GDNF-208ENST00000620847 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 MRVI1Q9Y6F6 885 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 PALLDQ8WX93 1383 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 SPDYE4A6NLX3 237 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 JAK2O60674 1132 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 STRCP1A6NGW2 1772 aa9.56□□□□□ -0.88
GDNF-208ENST00000620847 H7C1W4 665 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 CABP4P57796 275 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 RESTQ13127 1097 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 DDX17Q92841 729 aaKnown RBP9.55□□□□□ -0.88
GDNF-208ENST00000620847 FEZ1Q99689 392 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
GDNF-208ENST00000620847 FGD1P98174 961 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 TYRO3Q06418 890 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 CAMK4Q16566 473 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 LMBR1LQ6UX01 489 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
GDNF-208ENST00000620847 ATG9AQ7Z3C6 839 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 DDX19AQ9NUU7 478 aaKnown RBP9.55□□□□□ -0.88
GDNF-208ENST00000620847 DACT1Q9NYF0 836 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 SPEF2Q9C093 1822 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 DCCP43146 1447 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 STOX1Q6ZVD7 989 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 SMARCC2Q8TAQ2 1214 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 CHMP3Q9Y3E7 222 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 PAPPAQ13219 1627 aa9.55□□□□□ -0.88
GDNF-208ENST00000620847 TNS3Q68CZ2 1445 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 NBPF26B4DH59 902 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 RIOK3O14730 519 aaKnown RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 BRF1Q92994 677 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 PGBD1Q96JS3 809 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 TNMDQ9H2S6 317 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 CLSTN2Q9H4D0 955 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 GPR108Q9NPR9 543 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 SCRN1Q12765 414 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 CHRNA2Q15822 529 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 KIAA1524Q8TCG1 905 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 GOLGA6L4A6NEF3 574 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 PFKFB2O60825 505 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 HMGB1P09429 215 aaKnown RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 ATF3P18847 181 aa9.54□□□□□ -0.88
GDNF-208ENST00000620847 ZNF771Q7L3S4 317 aaPredicted RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 LLPHQ9BRT6 129 aaKnown RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 ZSCAN16Q9H4T2 348 aaPredicted RBP9.54□□□□□ -0.88
GDNF-208ENST00000620847 CPDO75976 1380 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 AGXT2Q9BYV1 514 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 PAG1Q9NWQ8 432 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 NR1I2O75469 434 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 HSP90B1P14625 803 aaKnown RBP9.53□□□□□ -0.88
GDNF-208ENST00000620847 U2AF2P26368 475 aaKnown RBP eCLIP9.53□□□□□ -0.88
GDNF-208ENST00000620847 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
GDNF-208ENST00000620847 CKAP2LQ8IYA6 745 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 ANKRD7Q92527 254 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 KCPQ6ZWJ8 1503 aa9.53□□□□□ -0.88
GDNF-208ENST00000620847 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.88
GDNF-208ENST00000620847 LUZP1Q86V48 1076 aa9.52□□□□□ -0.88
GDNF-208ENST00000620847 CBX8Q9HC52 389 aa9.52□□□□□ -0.88
GDNF-208ENST00000620847 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.88
GDNF-208ENST00000620847 OGFRQ9NZT2 677 aa9.52□□□□□ -0.88
GDNF-208ENST00000620847 GOLIM4O00461 696 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 IL15P40933 162 aaPredicted RBP9.52□□□□□ -0.89
GDNF-208ENST00000620847 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 ZMYM1Q5SVZ6 1142 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 LRRC2Q9BYS8 371 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 H3BQV1 296 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms