RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 DIP2BQ9P265 1576 aa18.88■□□□□ 0.61
DKC1-213ENST00000620277 NPHP3Q7Z494 1330 aa18.88■□□□□ 0.61
DKC1-213ENST00000620277 MTX1Q13505 466 aa18.88■□□□□ 0.61
DKC1-213ENST00000620277 CLSTN2Q9H4D0 955 aa18.88■□□□□ 0.61
DKC1-213ENST00000620277 RXRAP19793 462 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 GTF3C6Q969F1 213 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 ANKRD1Q15327 319 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 PTPDC1A2A3K4 754 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 HIP1O00291 1037 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 PTPN12Q05209 780 aaKnown RBP18.87■□□□□ 0.61
DKC1-213ENST00000620277 WASHC4Q2M389 1173 aa18.87■□□□□ 0.61
DKC1-213ENST00000620277 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
DKC1-213ENST00000620277 GORABQ5T7V8 394 aa18.86■□□□□ 0.61
DKC1-213ENST00000620277 AOPEPQ8N6M6 819 aa18.86■□□□□ 0.61
DKC1-213ENST00000620277 FSIP1Q8NA03 581 aa18.86■□□□□ 0.61
DKC1-213ENST00000620277 PIK3C2AO00443 1686 aa18.86■□□□□ 0.61
DKC1-213ENST00000620277 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
DKC1-213ENST00000620277 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 TMX1Q9H3N1 280 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 DDX19AQ9NUU7 478 aaKnown RBP18.85■□□□□ 0.61
DKC1-213ENST00000620277 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
DKC1-213ENST00000620277 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
DKC1-213ENST00000620277 RESTQ13127 1097 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 AMOTQ4VCS5 1084 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 CCDC73Q6ZRK6 1079 aa18.85■□□□□ 0.61
DKC1-213ENST00000620277 MTERF4Q7Z6M4 381 aaKnown RBP18.85■□□□□ 0.61
DKC1-213ENST00000620277 MCMDC2Q4G0Z9 681 aa18.84■□□□□ 0.61
DKC1-213ENST00000620277 PI16Q6UXB8 463 aa18.84■□□□□ 0.61
DKC1-213ENST00000620277 CCDC112Q8NEF3 446 aa18.84■□□□□ 0.61
DKC1-213ENST00000620277 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
DKC1-213ENST00000620277 AGLP35573 1532 aa18.84■□□□□ 0.61
DKC1-213ENST00000620277 KINO60870 393 aaKnown RBP18.84■□□□□ 0.61
DKC1-213ENST00000620277 SKILP12757 684 aa18.84■□□□□ 0.61
DKC1-213ENST00000620277 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
DKC1-213ENST00000620277 PUS3Q9BZE2 481 aaKnown RBP18.84■□□□□ 0.61
DKC1-213ENST00000620277 NWD1Q149M9 1564 aa18.83■□□□□ 0.61
DKC1-213ENST00000620277 SMC2O95347 1197 aa18.83■□□□□ 0.61
DKC1-213ENST00000620277 KCNH5Q8NCM2 988 aa18.83■□□□□ 0.61
DKC1-213ENST00000620277 HOXB7P09629 217 aa18.83■□□□□ 0.6
DKC1-213ENST00000620277 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 ZRSR1Q15695 479 aaKnown RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 FAM177A1Q8N128 213 aaPredicted RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 ZNF609O15014 1411 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 CTDNEP1O95476 244 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 ZSCAN20P17040 1043 aaPredicted RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 MARCKSP29966 332 aaPredicted RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 GOLGA8FQ08AF8 430 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 GOLGA8DPQ0D2H9 430 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 TTLL7Q6ZT98 887 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 ARHGEF25Q86VW2 580 aa18.82■□□□□ 0.6
DKC1-213ENST00000620277 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 METTL22Q9BUU2 404 aaPredicted RBP18.82■□□□□ 0.6
DKC1-213ENST00000620277 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
DKC1-213ENST00000620277 A1BGP04217 495 aa18.81■□□□□ 0.6
DKC1-213ENST00000620277 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
DKC1-213ENST00000620277 NSUN7Q8NE18 718 aaKnown RBP18.81■□□□□ 0.6
DKC1-213ENST00000620277 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
DKC1-213ENST00000620277 CCDC69A6NI79 296 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 KCNB2Q92953 911 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 AIFM3Q96NN9 605 aa18.8■□□□□ 0.6
DKC1-213ENST00000620277 A0A0G2JS52 829 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 PAG1Q9NWQ8 432 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 CLIC4Q9Y696 253 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
DKC1-213ENST00000620277 ATP5JP18859 108 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 PLA2G4DQ86XP0 818 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 CCDC82Q8N4S0 544 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 ZNF215Q9UL58 517 aaPredicted RBP18.79■□□□□ 0.6
DKC1-213ENST00000620277 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
DKC1-213ENST00000620277 PXDNLA1KZ92 1463 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 ZNF771Q7L3S4 317 aaPredicted RBP18.78■□□□□ 0.6
DKC1-213ENST00000620277 SMAP1Q8IYB5 467 aaPredicted RBP18.78■□□□□ 0.6
DKC1-213ENST00000620277 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 U3KPZ7 1027 aaPredicted RBP18.78■□□□□ 0.6
DKC1-213ENST00000620277 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 E7EWF7 191 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
DKC1-213ENST00000620277 STK38Q15208 465 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 DHX32Q7L7V1 743 aaKnown RBP18.78■□□□□ 0.6
DKC1-213ENST00000620277 LRRC8AQ8IWT6 810 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 CHMP4AQ9BY43 222 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 HMG20BQ9P0W2 317 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 ELP1O95163 1332 aa18.78■□□□□ 0.6
DKC1-213ENST00000620277 CABP4P57796 275 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 KRT32Q14532 448 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 PTPN14Q15678 1187 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 APPP05067 770 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 NDUFA8P51970 172 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 DPCR1Q3MIW9 517 aa18.77■□□□□ 0.6
DKC1-213ENST00000620277 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.59
DKC1-213ENST00000620277 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.59
DKC1-213ENST00000620277 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.59
DKC1-213ENST00000620277 ATP2B1P20020 1258 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms