RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
PSMC3-213ENST00000619920 ARHGEF1Q92888 912 aaKnown RBP18.49■□□□□ 0.55
PSMC3-213ENST00000619920 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
PSMC3-213ENST00000619920 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
PSMC3-213ENST00000619920 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
PSMC3-213ENST00000619920 ZNF512BQ96KM6 892 aaPredicted RBP18.48■□□□□ 0.55
PSMC3-213ENST00000619920 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
PSMC3-213ENST00000619920 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
PSMC3-213ENST00000619920 SLKQ9H2G2 1235 aaPredicted RBP18.48■□□□□ 0.55
PSMC3-213ENST00000619920 PALD1Q9ULE6 856 aa18.48■□□□□ 0.55
PSMC3-213ENST00000619920 SPEF2Q9C093 1822 aa18.48■□□□□ 0.55
PSMC3-213ENST00000619920 MED23Q9ULK4 1368 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 ADORA1P30542 326 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
PSMC3-213ENST00000619920 MCM2P49736 904 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 TTC39AQ5SRH9 613 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 SRP68Q9UHB9 627 aaKnown RBP18.47■□□□□ 0.55
PSMC3-213ENST00000619920 BRWD3Q6RI45 1802 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 RFC4P35249 363 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 KCNB2Q92953 911 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
PSMC3-213ENST00000619920 GOLIM4O00461 696 aa18.46■□□□□ 0.55
PSMC3-213ENST00000619920 PTH1RQ03431 593 aa18.46■□□□□ 0.55
PSMC3-213ENST00000619920 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
PSMC3-213ENST00000619920 LRRFIP1Q32MZ4 808 aaKnown RBP18.46■□□□□ 0.55
PSMC3-213ENST00000619920 DDX46Q7L014 1031 aaKnown RBP18.46■□□□□ 0.55
PSMC3-213ENST00000619920 MAP4K1Q92918 833 aa18.46■□□□□ 0.55
PSMC3-213ENST00000619920 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
PSMC3-213ENST00000619920 SEC31BQ9NQW1 1179 aa18.46■□□□□ 0.55
PSMC3-213ENST00000619920 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 GTF2E1P29083 439 aaPredicted RBP18.45■□□□□ 0.54
PSMC3-213ENST00000619920 NEK4P51957 841 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 TPTE2Q6XPS3 522 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 LPIN2Q92539 896 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 CHMP5Q9NZZ3 219 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
PSMC3-213ENST00000619920 TRIM37O94972 964 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 FGFR2P21802 821 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 DDIT3P35638 169 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
PSMC3-213ENST00000619920 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 HELLSQ9NRZ9 838 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 CIZ1Q9ULV3 898 aaPredicted RBP18.44■□□□□ 0.54
PSMC3-213ENST00000619920 SNX14Q9Y5W7 946 aa18.44■□□□□ 0.54
PSMC3-213ENST00000619920 HSP90AA1P07900 732 aaKnown RBP18.43■□□□□ 0.54
PSMC3-213ENST00000619920 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
PSMC3-213ENST00000619920 MCMDC2Q4G0Z9 681 aa18.43■□□□□ 0.54
PSMC3-213ENST00000619920 UQCRFS1P1P0C7P4 283 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 SLC5A1P13866 664 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 SSFA2P28290 1259 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
PSMC3-213ENST00000619920 TAF5LO75529 589 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 ZFYP08048 801 aaPredicted RBP18.42■□□□□ 0.54
PSMC3-213ENST00000619920 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
PSMC3-213ENST00000619920 NLRP3Q96P20 1036 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 TM6SF1Q9BZW5 370 aa18.42■□□□□ 0.54
PSMC3-213ENST00000619920 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
PSMC3-213ENST00000619920 C4AP0C0L4 1744 aa18.41■□□□□ 0.54
PSMC3-213ENST00000619920 ZKSCAN1P17029 563 aaPredicted RBP18.41■□□□□ 0.54
PSMC3-213ENST00000619920 NBR1Q14596 966 aa18.41■□□□□ 0.54
PSMC3-213ENST00000619920 ZMYM1Q5SVZ6 1142 aa18.41■□□□□ 0.54
PSMC3-213ENST00000619920 ANKRD18AQ8IVF6 992 aa18.41■□□□□ 0.54
PSMC3-213ENST00000619920 RASEFQ8IZ41 740 aa18.41■□□□□ 0.54
PSMC3-213ENST00000619920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
PSMC3-213ENST00000619920 PHF14O94880 888 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
PSMC3-213ENST00000619920 KCNJ4P48050 445 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 NFKBIBQ15653 356 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 PRPF40BQ6NWY9 871 aaKnown RBP18.4■□□□□ 0.54
PSMC3-213ENST00000619920 C3orf67Q6ZVT6 689 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 ZNF589Q86UQ0 364 aaPredicted RBP18.4■□□□□ 0.54
PSMC3-213ENST00000619920 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
PSMC3-213ENST00000619920 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
PSMC3-213ENST00000619920 ARAP2Q8WZ64 1704 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 RXRBP28702 533 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 SCARF1Q14162 830 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
PSMC3-213ENST00000619920 CREB3L3Q68CJ9 461 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
PSMC3-213ENST00000619920 HMG20BQ9P0W2 317 aa18.39■□□□□ 0.53
PSMC3-213ENST00000619920 PLSCR1O15162 318 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 ZAP70P43403 619 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 CHRNDQ07001 517 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 TXNRD1Q16881 649 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 TSGA10IPQ3SY00 556 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
PSMC3-213ENST00000619920 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 SLC27A2O14975 620 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 MCAMP43121 646 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 NFIXQ14938 502 aa18.38■□□□□ 0.53
PSMC3-213ENST00000619920 PHKA1P46020 1223 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms