RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 IMPACTQ9P2X3 320 aa10.16□□□□□ -0.78
C9orf72-206ENST00000619707 FAM160A1Q05DH4 1040 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 ZRSR1Q15695 479 aaKnown RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 FBXW7Q969H0 707 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 EAF2Q96CJ1 260 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 NEK1Q96PY6 1258 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 GOLPH3LQ9H4A5 285 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 RCOR1Q9UKL0 485 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 A0A087WWV3 80 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 H2AFXP16104 143 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 HOXC9P31274 260 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 FOSBP53539 338 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 SYT10Q6XYQ8 523 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 Q6ZUG5 572 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 ZNF589Q86UQ0 364 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 CCDC150Q8NCX0 1101 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 L2HGDHQ9H9P8 463 aa10.15□□□□□ -0.78
C9orf72-206ENST00000619707 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.15□□□□□ -0.78
C9orf72-206ENST00000619707 NUTM2GQ5VZR2 741 aa10.15□□□□□ -0.79
C9orf72-206ENST00000619707 FSIP1Q8NA03 581 aa10.15□□□□□ -0.79
C9orf72-206ENST00000619707 PPP1R13BQ96KQ4 1090 aa10.15□□□□□ -0.79
C9orf72-206ENST00000619707 ZNF396Q96N95 335 aaPredicted RBP10.15□□□□□ -0.79
C9orf72-206ENST00000619707 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.79
C9orf72-206ENST00000619707 PTPRUQ92729 1446 aa10.15□□□□□ -0.79
C9orf72-206ENST00000619707 SASH1O94885 1247 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 ME1P48163 572 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 NLRP6P59044 892 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 CERS3Q8IU89 383 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 FTOQ9C0B1 505 aaKnown RBP eCLIP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 TLR7Q9NYK1 1049 aaKnown RBP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 TAF5LO75529 589 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 SMC2O95347 1197 aa10.14□□□□□ -0.79
C9orf72-206ENST00000619707 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 E4F1Q66K89 784 aaPredicted RBP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 NAA16Q6N069 864 aaPredicted RBP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 ARGLU1Q9NWB6 273 aaPredicted RBP10.14□□□□□ -0.79
C9orf72-206ENST00000619707 PSDA5PKW4 1024 aaPredicted RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 TUBB4AP04350 444 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 CLCN6P51797 869 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 ARHGAP29Q52LW3 1261 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 HOMER1Q86YM7 354 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 SDF4Q9BRK5 362 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 LLPHQ9BRT6 129 aaKnown RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 JCADQ9P266 1359 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 CYP2C19P33261 490 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 DHX8Q14562 1220 aaKnown RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 ATL3Q6DD88 541 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 TMC6Q7Z403 805 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 USHBP1Q8N6Y0 703 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 SIL1Q9H173 461 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 FHOD1Q9Y613 1164 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 TPM4P67936 248 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 SCRN1Q12765 414 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 CWF19L2Q2TBE0 894 aaKnown RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 USPL1Q5W0Q7 1092 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 ENGASEQ8NFI3 743 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 ERCC4Q92889 916 aaPredicted RBP10.13□□□□□ -0.79
C9orf72-206ENST00000619707 USP28Q96RU2 1077 aa10.13□□□□□ -0.79
C9orf72-206ENST00000619707 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 TMCO3Q6UWJ1 677 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 SMARCC2Q8TAQ2 1214 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 UBXN4Q92575 508 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 SYTL4Q96C24 671 aaPredicted RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 U3KPZ7 1027 aaPredicted RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 CEMIPQ8WUJ3 1361 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 KCNQ3O43525 872 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 TEFQ10587 303 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 KSR2Q6VAB6 950 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 MRPS27Q92552 414 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 LRRC2Q9BYS8 371 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 XPO4Q9C0E2 1151 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 ESF1Q9H501 851 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 IFNKQ9P0W0 207 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 AGLP35573 1532 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 NWD1Q149M9 1564 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 PTPDC1A2A3K4 754 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 CCP110O43303 1012 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 KCNJ6P48051 423 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 ARMCX5Q6P1M9 558 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 LRRN4CLQ8ND94 238 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 MNS1Q8NEH6 495 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 SUCLG2Q96I99 432 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
C9orf72-206ENST00000619707 LGR6Q9HBX8 967 aa10.12□□□□□ -0.79
C9orf72-206ENST00000619707 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms