RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 XDHP47989 1333 aa15.28■□□□□ 0.04
UPF3B-204ENST00000619445 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 PSMD14O00487 310 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 MAP2K2P36507 400 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 CAPNS2Q96L46 248 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
UPF3B-204ENST00000619445 THSD7BQ9C0I4 1608 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 UFL1O94874 794 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
UPF3B-204ENST00000619445 CST9Q5W186 159 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
UPF3B-204ENST00000619445 TSPYL6Q8N831 410 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
UPF3B-204ENST00000619445 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 RTL9Q8NET4 1388 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 ZNF609O15014 1411 aa15.26■□□□□ 0.03
UPF3B-204ENST00000619445 TRAF5O00463 557 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 ATP2B4P23634 1241 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 CTSWP56202 376 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 SAPCD2Q86UD0 394 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 WDR63Q8IWG1 891 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 GPR101Q96P66 508 aaPredicted RBP15.25■□□□□ 0.03
UPF3B-204ENST00000619445 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
UPF3B-204ENST00000619445 CA12O43570 354 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 VIL1P09327 827 aaKnown RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 AGBL3Q8NEM8 1001 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 GLIS2Q9BZE0 524 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 PSME4Q14997 1843 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 IGKV5-2P06315 115 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 PODNQ7Z5L7 613 aa15.24■□□□□ 0.03
UPF3B-204ENST00000619445 DCPSQ96C86 337 aaKnown RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 BSDC1Q9NW68 430 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
UPF3B-204ENST00000619445 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 MMP14P50281 582 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 FLIIQ13045 1269 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 DOK7Q18PE1 504 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 KRT26Q7Z3Y9 468 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
UPF3B-204ENST00000619445 POLR2AP24928 1970 aaKnown RBP15.22■□□□□ 0.03
UPF3B-204ENST00000619445 SCN9AQ15858 1988 aa15.22■□□□□ 0.03
UPF3B-204ENST00000619445 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
UPF3B-204ENST00000619445 IGHMBP2P38935 993 aaKnown RBP15.22■□□□□ 0.03
UPF3B-204ENST00000619445 CCDC184Q52MB2 194 aa15.22■□□□□ 0.03
UPF3B-204ENST00000619445 CYP4F22Q6NT55 531 aa15.22■□□□□ 0.03
UPF3B-204ENST00000619445 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
UPF3B-204ENST00000619445 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
UPF3B-204ENST00000619445 COL4A1P02462 1669 aa15.21■□□□□ 0.03
UPF3B-204ENST00000619445 MED23Q9ULK4 1368 aa15.21■□□□□ 0.03
UPF3B-204ENST00000619445 H7C1W4 665 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 LBX1P52954 281 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.02
UPF3B-204ENST00000619445 NOGQ13253 232 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 FKBP5Q13451 457 aaPredicted RBP15.21■□□□□ 0.02
UPF3B-204ENST00000619445 KIF4BQ2VIQ3 1234 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 TBC1D10BQ4KMP7 808 aaPredicted RBP15.21■□□□□ 0.02
UPF3B-204ENST00000619445 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.02
UPF3B-204ENST00000619445 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 UBE3BQ7Z3V4 1068 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 SULF1Q8IWU6 871 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 ZNF408Q9H9D4 720 aa15.21■□□□□ 0.02
UPF3B-204ENST00000619445 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 CAPN15O75808 1086 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 HSPA8P11142 646 aaKnown RBP15.2■□□□□ 0.02
UPF3B-204ENST00000619445 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
UPF3B-204ENST00000619445 ZNF280AP59817 542 aaPredicted RBP15.2■□□□□ 0.02
UPF3B-204ENST00000619445 GRM1Q13255 1194 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 GCKRQ14397 625 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
UPF3B-204ENST00000619445 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 C2orf69Q8N8R5 385 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
UPF3B-204ENST00000619445 ANKRD2Q9GZV1 360 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 LEMD3Q9Y2U8 911 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 MYO3BQ8WXR4 1341 aa15.2■□□□□ 0.02
UPF3B-204ENST00000619445 USP17L3A6NCW0 530 aa15.19■□□□□ 0.02
UPF3B-204ENST00000619445 USP17L4A6NCW7 530 aa15.19■□□□□ 0.02
UPF3B-204ENST00000619445 USP17L1Q7RTZ2 530 aa15.19■□□□□ 0.02
UPF3B-204ENST00000619445 JARID2Q92833 1246 aaPredicted RBP15.19■□□□□ 0.02
UPF3B-204ENST00000619445 GREM2Q9H772 168 aa15.19■□□□□ 0.02
UPF3B-204ENST00000619445 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
UPF3B-204ENST00000619445 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 CCT4P50991 539 aaKnown RBP15.18■□□□□ 0.02
UPF3B-204ENST00000619445 HUNKP57058 714 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 RBM26Q5T8P6 1007 aaKnown RBP15.18■□□□□ 0.02
UPF3B-204ENST00000619445 G2E3Q7L622 706 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 MPHOSPH8Q99549 860 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 COA1Q9GZY4 146 aa15.18■□□□□ 0.02
UPF3B-204ENST00000619445 GBA2Q9HCG7 927 aaPredicted RBP15.18■□□□□ 0.02
UPF3B-204ENST00000619445 KCNQ5Q9NR82 932 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms