RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 SUPT20HQ8NEM7 779 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 HLA-CQ95604 372 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 LMOD3Q0VAK6 560 aa7.27□□□□□ -1.25
CBWD3-215ENST00000619322 KCTD12Q96CX2 325 aaKnown RBP7.27□□□□□ -1.25
CBWD3-215ENST00000619322 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 SAFB2Q14151 953 aaKnown RBP eCLIP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 MASTLQ96GX5 879 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 ZFRQ96KR1 1074 aaKnown RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 PARP3Q9Y6F1 533 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 IRS2Q9Y4H2 1338 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 GNAT3A8MTJ3 354 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 MAP2K5Q13163 448 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 USP50Q70EL3 339 aaPredicted RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 MTMR14Q8NCE2 650 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 TFCP2L1Q9NZI6 479 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 ZNF652Q9Y2D9 606 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 PDS5AQ29RF7 1337 aaKnown RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 HSP90B1P14625 803 aaKnown RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 PARP9Q8IXQ6 854 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 KRI1Q8N9T8 703 aaKnown RBP7.26□□□□□ -1.25
CBWD3-215ENST00000619322 NLGN2Q8NFZ4 835 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 FMNL2Q96PY5 1086 aa7.26□□□□□ -1.25
CBWD3-215ENST00000619322 IQCA1LA6NCM1 817 aa7.25□□□□□ -1.25
CBWD3-215ENST00000619322 POTECB2RU33 542 aa7.25□□□□□ -1.25
CBWD3-215ENST00000619322 HSP90AB3PQ58FF7 597 aa7.25□□□□□ -1.25
CBWD3-215ENST00000619322 DALRD3Q5D0E6 543 aaKnown RBP7.25□□□□□ -1.25
CBWD3-215ENST00000619322 COL4A6Q14031 1691 aa7.25□□□□□ -1.25
CBWD3-215ENST00000619322 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
CBWD3-215ENST00000619322 STARD3NLO95772 234 aa7.25□□□□□ -1.25
CBWD3-215ENST00000619322 TRIM66O15016 1216 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 SRGNP10124 158 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 ATP6V1AP38606 617 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
CBWD3-215ENST00000619322 SLC10A3P09131 477 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 C1orf141Q5JVX7 400 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 SWT1Q5T5J6 900 aaKnown RBP7.24□□□□□ -1.25
CBWD3-215ENST00000619322 MS4A1P11836 297 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 PBX2P40425 430 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 SF3B3Q15393 1217 aaKnown RBP7.24□□□□□ -1.25
CBWD3-215ENST00000619322 MAP3K11Q16584 847 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 ZNF790Q6PG37 636 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 PNMA8AQ86V59 439 aaPredicted RBP7.24□□□□□ -1.25
CBWD3-215ENST00000619322 AMIGO3Q86WK7 504 aa7.24□□□□□ -1.25
CBWD3-215ENST00000619322 EP400Q96L91 3159 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 MAP3K15Q6ZN16 1313 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 PTPN5P54829 565 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 GPC2Q8N158 579 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 PPP2R3BQ9Y5P8 575 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 ALDH1B1P30837 517 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 MAP2K2P36507 400 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 PLXNB2O15031 1838 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 SIPA1L1O43166 1804 aa7.23□□□□□ -1.25
CBWD3-215ENST00000619322 LRRC37A2A6NM11 1700 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 NFKBIEO00221 500 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 DPF2Q92785 391 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 WBP1LQ9NX94 342 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 UTYO14607 1347 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 MAP4K4O95819 1239 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-215ENST00000619322 SNRPA1P09661 255 aaKnown RBP7.22□□□□□ -1.25
CBWD3-215ENST00000619322 CABP4P57796 275 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 MRIQ9BWK5 157 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 PANK3Q9H999 370 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 MMRN1Q13201 1228 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 ZNF530Q6P9A1 599 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-215ENST00000619322 MRPL50Q8N5N7 158 aaKnown RBP7.22□□□□□ -1.25
CBWD3-215ENST00000619322 ZBED3Q96IU2 234 aaPredicted RBP7.22□□□□□ -1.25
CBWD3-215ENST00000619322 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
CBWD3-215ENST00000619322 ZNF280AP59817 542 aaPredicted RBP7.21□□□□□ -1.25
CBWD3-215ENST00000619322 CCDC93Q567U6 631 aa7.21□□□□□ -1.25
CBWD3-215ENST00000619322 TTLL6Q8N841 843 aa7.21□□□□□ -1.25
CBWD3-215ENST00000619322 ASAP1Q9ULH1 1129 aa7.21□□□□□ -1.25
CBWD3-215ENST00000619322 LTBP2Q14767 1821 aa7.21□□□□□ -1.25
CBWD3-215ENST00000619322 NFIXQ14938 502 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.21□□□□□ -1.26
CBWD3-215ENST00000619322 TULP1O00294 542 aaPredicted RBP7.21□□□□□ -1.26
CBWD3-215ENST00000619322 ZBTB7AO95365 584 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 MMP10P09238 476 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 CFAP53Q96M91 514 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 PLSCR2Q9NRY7 297 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
CBWD3-215ENST00000619322 NTSR2O95665 410 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 MTHFSDQ2M296 383 aaKnown RBP7.2□□□□□ -1.26
CBWD3-215ENST00000619322 ISCA1Q9BUE6 129 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 PDGFDQ9GZP0 370 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-215ENST00000619322 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 MYO3BQ8WXR4 1341 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 DPEP1P16444 411 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 TTLL12Q14166 644 aaPredicted RBP7.2□□□□□ -1.26
CBWD3-215ENST00000619322 RRS1Q15050 365 aaKnown RBP7.2□□□□□ -1.26
CBWD3-215ENST00000619322 NFE2L2Q16236 605 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 PRR5LQ6MZQ0 368 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 SP8Q8IXZ3 490 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 FAM117AQ9C073 453 aa7.2□□□□□ -1.26
CBWD3-215ENST00000619322 MTHFSP49914 203 aa7.19□□□□□ -1.26
CBWD3-215ENST00000619322 PDE4DQ08499 809 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms