RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 MS4A1P11836 297 aa16.88■□□□□ 0.29
PDCD6-213ENST00000618970 EPHX2P34913 555 aa16.88■□□□□ 0.29
PDCD6-213ENST00000618970 FTSJ3Q8IY81 847 aaKnown RBP16.88■□□□□ 0.29
PDCD6-213ENST00000618970 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
PDCD6-213ENST00000618970 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
PDCD6-213ENST00000618970 ITGBL1O95965 494 aaPredicted RBP16.87■□□□□ 0.29
PDCD6-213ENST00000618970 TTLL11Q8NHH1 800 aa16.87■□□□□ 0.29
PDCD6-213ENST00000618970 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
PDCD6-213ENST00000618970 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
PDCD6-213ENST00000618970 CNTNAP1P78357 1384 aa16.87■□□□□ 0.29
PDCD6-213ENST00000618970 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
PDCD6-213ENST00000618970 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
PDCD6-213ENST00000618970 GPC2Q8N158 579 aa16.86■□□□□ 0.29
PDCD6-213ENST00000618970 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
PDCD6-213ENST00000618970 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
PDCD6-213ENST00000618970 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
PDCD6-213ENST00000618970 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
PDCD6-213ENST00000618970 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
PDCD6-213ENST00000618970 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
PDCD6-213ENST00000618970 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
PDCD6-213ENST00000618970 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
PDCD6-213ENST00000618970 CTSWP56202 376 aa16.84■□□□□ 0.29
PDCD6-213ENST00000618970 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
PDCD6-213ENST00000618970 SEC31BQ9NQW1 1179 aa16.84■□□□□ 0.29
PDCD6-213ENST00000618970 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
PDCD6-213ENST00000618970 CAPN15O75808 1086 aa16.83■□□□□ 0.28
PDCD6-213ENST00000618970 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
PDCD6-213ENST00000618970 PNMA8AQ86V59 439 aaPredicted RBP16.83■□□□□ 0.28
PDCD6-213ENST00000618970 LARGE2Q8N3Y3 721 aa16.83■□□□□ 0.28
PDCD6-213ENST00000618970 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.28
PDCD6-213ENST00000618970 LRRFIP2Q9Y608 721 aaKnown RBP16.83■□□□□ 0.28
PDCD6-213ENST00000618970 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 GNAI3P08754 354 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
PDCD6-213ENST00000618970 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
PDCD6-213ENST00000618970 SCNN1DP51172 638 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
PDCD6-213ENST00000618970 GREM2Q9H772 168 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 ZBTB40Q9NUA8 1239 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 DDX19BQ9UMR2 479 aa16.82■□□□□ 0.28
PDCD6-213ENST00000618970 VEGFBP49765 207 aa16.81■□□□□ 0.28
PDCD6-213ENST00000618970 AOC3Q16853 763 aa16.81■□□□□ 0.28
PDCD6-213ENST00000618970 GRIPAP1Q4V328 841 aa16.81■□□□□ 0.28
PDCD6-213ENST00000618970 CELF1Q92879 486 aaKnown RBP16.81■□□□□ 0.28
PDCD6-213ENST00000618970 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
PDCD6-213ENST00000618970 LRRC37AA6NMS7 1700 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 EPS15P42566 896 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
PDCD6-213ENST00000618970 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 CCDC152Q4G0S7 254 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 NIM1KQ8IY84 436 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
PDCD6-213ENST00000618970 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
PDCD6-213ENST00000618970 FOXN1O15353 648 aa16.79■□□□□ 0.28
PDCD6-213ENST00000618970 GNAI2P04899 355 aa16.79■□□□□ 0.28
PDCD6-213ENST00000618970 LMOD1P29536 600 aaPredicted RBP16.79■□□□□ 0.28
PDCD6-213ENST00000618970 C1orf115Q9H7X2 142 aa16.79■□□□□ 0.28
PDCD6-213ENST00000618970 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
PDCD6-213ENST00000618970 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDCD6-213ENST00000618970 MTX1Q13505 466 aa16.78■□□□□ 0.28
PDCD6-213ENST00000618970 GRAPQ13588 217 aa16.78■□□□□ 0.28
PDCD6-213ENST00000618970 DDX46Q7L014 1031 aaKnown RBP16.78■□□□□ 0.28
PDCD6-213ENST00000618970 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
PDCD6-213ENST00000618970 ITGA6P23229 1130 aa16.77■□□□□ 0.28
PDCD6-213ENST00000618970 ZNF594Q96JF6 807 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-213ENST00000618970 RTFDC1Q9BY42 306 aaPredicted RBP16.77■□□□□ 0.28
PDCD6-213ENST00000618970 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
PDCD6-213ENST00000618970 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
PDCD6-213ENST00000618970 BBOX1O75936 387 aa16.76■□□□□ 0.27
PDCD6-213ENST00000618970 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
PDCD6-213ENST00000618970 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
PDCD6-213ENST00000618970 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
PDCD6-213ENST00000618970 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 PNMA6EA0A0J9YXQ4 647 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-213ENST00000618970 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
PDCD6-213ENST00000618970 CXCL9Q07325 125 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-213ENST00000618970 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
PDCD6-213ENST00000618970 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 HDAC5Q9UQL6 1122 aa16.75■□□□□ 0.27
PDCD6-213ENST00000618970 ANKRD18BA2A2Z9 1011 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 TRAF5O00463 557 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
PDCD6-213ENST00000618970 IFIT5Q13325 482 aaKnown RBP16.74■□□□□ 0.27
PDCD6-213ENST00000618970 POLA2Q14181 598 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 CEP85Q6P2H3 762 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
PDCD6-213ENST00000618970 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 MPNDQ8N594 471 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 KLHDC4Q8TBB5 520 aa16.74■□□□□ 0.27
PDCD6-213ENST00000618970 GPRC5DQ9NZD1 345 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms