RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 ZSCAN22P10073 491 aaPredicted RBP16.44■□□□□ 0.22
PTPN9-206ENST00000618819 GEN1Q17RS7 908 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
PTPN9-206ENST00000618819 ALDH3A1P30838 453 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 PRR16Q569H4 304 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 VPS52Q8N1B4 723 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 NKIRAS1Q9NYS0 192 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN9-206ENST00000618819 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
PTPN9-206ENST00000618819 EVCP57679 992 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 DACT3Q96B18 629 aaPredicted RBP16.43■□□□□ 0.22
PTPN9-206ENST00000618819 LRRC45Q96CN5 670 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 TMOD2Q9NZR1 351 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
PTPN9-206ENST00000618819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN9-206ENST00000618819 TTC21AQ8NDW8 1320 aa16.43■□□□□ 0.22
PTPN9-206ENST00000618819 PRPHP41219 470 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 KRT83P78385 493 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 THUMPD2Q9BTF0 503 aaKnown RBP16.42■□□□□ 0.22
PTPN9-206ENST00000618819 TPX2Q9ULW0 747 aaKnown RBP16.42■□□□□ 0.22
PTPN9-206ENST00000618819 FAM169AQ9Y6X4 670 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 CAVIN2O95810 425 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 SLC12A5Q9H2X9 1139 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 MTRF1LQ9UGC7 380 aaKnown RBP16.42■□□□□ 0.22
PTPN9-206ENST00000618819 TRIM68Q6AZZ1 485 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 CCDC65Q8IXS2 484 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 BANK1Q8NDB2 785 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 MCUR1Q96AQ8 359 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
PTPN9-206ENST00000618819 SDCCAG8Q86SQ7 713 aaPredicted RBP16.42■□□□□ 0.22
PTPN9-206ENST00000618819 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 PEX19P40855 299 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
PTPN9-206ENST00000618819 MAP7Q14244 749 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 VCXQ9H320 206 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 UBXN1Q04323 297 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 TACC3Q9Y6A5 838 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 CCDC38Q502W7 563 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 CAVIN4Q5BKX8 364 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 UTP14AQ9BVJ6 771 aaKnown RBP16.41■□□□□ 0.22
PTPN9-206ENST00000618819 FYB2Q5VWT5 728 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 LMBR1Q8WVP7 490 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 MYD88Q99836 296 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 CRCPO75575 148 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 SNX16P57768 344 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 SCAPERQ9BY12 1400 aa16.41■□□□□ 0.22
PTPN9-206ENST00000618819 STX17P56962 302 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 RNASE9P60153 205 aaKnown RBP16.4■□□□□ 0.22
PTPN9-206ENST00000618819 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 ANKRD30BQ9BXX2 1392 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
PTPN9-206ENST00000618819 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 CA8P35219 290 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 F6X3S4 739 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 PPP1R21Q6ZMI0 780 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
PTPN9-206ENST00000618819 LRRC2Q9BYS8 371 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 IFNKQ9P0W0 207 aa16.4■□□□□ 0.22
PTPN9-206ENST00000618819 LRCH2Q5VUJ6 765 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 TMX3Q96JJ7 454 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 GOLGA6CA6NDK9 693 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 GOLGA6DP0CG33 693 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 GOLGA6AQ9NYA3 693 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 MCM7P33993 719 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 AKNAD1Q5T1N1 836 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 NEK1Q96PY6 1258 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 USH1CQ9Y6N9 552 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 LCA5Q86VQ0 697 aa16.39■□□□□ 0.21
PTPN9-206ENST00000618819 CCT6BQ92526 530 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 RPGRIP1LQ68CZ1 1315 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 TNNC1P63316 161 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 RASA3Q14644 834 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 DHX58Q96C10 678 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 DNM1Q05193 864 aaKnown RBP16.38■□□□□ 0.21
PTPN9-206ENST00000618819 TYRO3Q06418 890 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 CALCOCO2Q13137 446 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 MCM10Q7L590 875 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN9-206ENST00000618819 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-206ENST00000618819 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
PTPN9-206ENST00000618819 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 ANKIB1Q9P2G1 1089 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 COG7P83436 770 aa16.38■□□□□ 0.21
PTPN9-206ENST00000618819 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms