RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	DLG5	Q8TDM6	1919 aa		12.52	□□□□□ -0.41
CPEB1-215	ENST00000617958	ANKAR	Q7Z5J8	1434 aa		12.52	□□□□□ -0.41
CPEB1-215	ENST00000617958	CRYBG1	Q9Y4K1	1723 aa		12.52	□□□□□ -0.41
CPEB1-215	ENST00000617958	SASH3	O75995	380 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	ARID5B	Q14865	1188 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	CHRNA2	Q15822	529 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	MNS1	Q8NEH6	495 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	KCNB2	Q92953	911 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	PACS2	Q86VP3	889 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	PHACTR3	Q96KR7	559 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	LSG1	Q9H089	658 aa	Known RBP	12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	ARFGAP3	Q9NP61	516 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	DONSON	Q9NYP3	566 aa		12.51	□□□□□ -0.41
CPEB1-215	ENST00000617958	ARHGEF10	O15013	1369 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	APBB1	O00213	710 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	CCT4	P50991	539 aa	Known RBP	12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	CORO7	P57737	925 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	CEP120	Q8N960	986 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	LEO1	Q8WVC0	666 aa	Predicted RBP	12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	RILPL2	Q969X0	211 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	SPATA32	Q96LK8	384 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	NPHP1	O15259	732 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	EIF4A2	Q14240	407 aa	Known RBP	12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	LRRN4CL	Q8ND94	238 aa		12.5	□□□□□ -0.41
CPEB1-215	ENST00000617958	VPS37C	A5D8V6	355 aa	Predicted RBP	12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	ELL2	O00472	640 aa	Predicted RBP	12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	MCTP2	Q6DN12	878 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	THUMPD2	Q9BTF0	503 aa	Known RBP	12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	FUT8	Q9BYC5	575 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	TMX1	Q9H3N1	280 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	USP16	Q9Y5T5	823 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	MAP2K7	O14733	419 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	AMPH	P49418	695 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	CCDC83	Q8IWF9	413 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	LRRC59	Q96AG4	307 aa	Known RBP	12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	ZSWIM6	Q9HCJ5	1215 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	AXIN2	Q9Y2T1	843 aa		12.49	□□□□□ -0.41
CPEB1-215	ENST00000617958	EIF3CL	B5ME19	914 aa	Known RBP	12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	LMAN1	P49257	510 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	TPRN	Q4KMQ1	711 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	LARP1B	Q659C4	914 aa	Known RBP	12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	MMS22L	Q6ZRQ5	1243 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	FCHSD1	Q86WN1	690 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	EFCAB13	Q8IY85	973 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	EIF3C	Q99613	913 aa	Known RBP	12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	MED4	Q9NPJ6	270 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	ANO10	Q9NW15	660 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	PEAK1	Q9H792	1746 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	CCDC151	A5D8V7	595 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	BECN2	A8MW95	431 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	NR1I2	O75469	434 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	LARGE1	O95461	756 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	GNAI2	P04899	355 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	IL13	P35225	146 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	RABGGTA	Q92696	567 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	CHMP4C	Q96CF2	233 aa		12.48	□□□□□ -0.41
CPEB1-215	ENST00000617958	GC	P02774	474 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	BRD3	Q15059	726 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	DHX40	Q8IX18	779 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	MPHOSPH8	Q99549	860 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	FAM107B	Q9H098	131 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	GNAI3	P08754	354 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	KRT24	Q2M2I5	525 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	RSRC2	Q7L4I2	434 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	NBPF11	Q86T75	865 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	RASEF	Q8IZ41	740 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	BPIFA3	Q9BQP9	254 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	TACO1	Q9BSH4	297 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	NAT10	Q9H0A0	1025 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	ZCCHC17	Q9NP64	241 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	PDRG1	Q9NUG6	133 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	SEC31A	O94979	1220 aa	Known RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	SFPQ	P23246	707 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	EVC	P57679	992 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	ST3GAL1	Q11201	340 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	SULT6B1	Q6IMI4	303 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	BANK1	Q8NDB2	785 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	IL25	Q9H293	177 aa		12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.47	□□□□□ -0.41
CPEB1-215	ENST00000617958	SMC2	O95347	1197 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	DCTN1	Q14203	1278 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	ZRSR1	Q15695	479 aa	Known RBP	12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	TRIM65	Q6PJ69	517 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	CDC37L1	Q7L3B6	337 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	DRC1	Q96MC2	740 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	CXorf56	Q9H5V9	222 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	CYP46A1	Q9Y6A2	500 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	PARP3	Q9Y6F1	533 aa		12.46	□□□□□ -0.41
CPEB1-215	ENST00000617958	MARF1	Q9Y4F3	1742 aa	Known RBP	12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	CCDC196	A0A1B0GTZ2	297 aa		12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	FAM83G	A6ND36	823 aa		12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	TUBB4B	P68371	445 aa		12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	UNC5CL	Q8IV45	518 aa		12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	CEP57L1	Q8IYX8	460 aa		12.46	□□□□□ -0.42
CPEB1-215	ENST00000617958	PGBD1	Q96JS3	809 aa		12.46	□□□□□ -0.42

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